Job Description P27245 Confidence 93.91% Date Thu Jan 5 11:43:25 GMT 2012 Rank 234 Aligned Residues 81 % Identity 25% Template d1bjaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcription factor MotA, activation domain Resolution 2.19

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		I	T	A	A	Q	F	K	V	L	C	S	I	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	.	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K	L	T	T	G	G	A	A	I	C	E	Q	C	H	Q	L	V	G
Query Conservation																																					.
Alig confidence																																					.																		.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		L	N	E	K	T	A	T	I	L	I	T	I	A	K	K	D	F	I	T	A	A	E	V	R	E	V	H	P	D	L	G	N	A	V	V	N	S	N	I	G	V	L	I	K	K	G	L	V	E	K	S	G	D	.	.	.	.	.	.	.	G	L	I	I	T	G	E	A	Q	D	I	I	S	N	A	A	T	L	Y	A
Template Known Secondary structure		S														S	T	T	B								T		T	T	S														T	T	T	S					T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	L	H	Q	E	L	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	N	A	P	E	L	L	K
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions