Job Description P27245 Confidence 97.97% Date Thu Jan 5 11:43:25 GMT 2012 Rank 95 Aligned Residues 84 % Identity 20% Template c3pqkD_ PDB info PDB header:transcription Chain: D: PDB Molecule:biofilm growth-associated repressor; PDBTitle: crystal structure of the transcriptional repressor bigr from xylella2 fastidiosa Resolution 2.09 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	N	E	Y	L	S	P	L	D	I	T	A	A	Q	F	K	V	L	C	S	I	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K	L	T	T	G	G	A	A
Query Conservation
Alig confidence													.														.																																						.	.	.
Template Conservation													.														.																																						.	.	.
Template Sequence		N	E	V	A	N	L	L	K	T	L	S	.	H	P	V	R	L	X	L	V	C	T	L	V	E	.	G	E	F	S	V	G	E	L	E	Q	Q	I	G	I	G	Q	P	T	L	S	Q	Q	L	G	V	L	R	E	S	G	I	V	E	T	R	R	N	.	.	.	I	K	Q	I	F	Y	R	L	T	E	A	K	A	A
Template Known Secondary structure													.	S												T	.			B										T			T	T												T	T	S						S	.	.	.	S	S								S	S	T
Template Predicted Secondary structure													.														.																																						.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	E	Q	C	H	Q	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	V	N	A	L	Y	T	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions