Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence89.06%DateThu Jan 5 11:43:25 GMT 2012
Rank304Aligned Residues64
% Identity17%Templatec3p9kD_
PDB info PDB header:transferaseChain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50... ......60....... ..70.........80........ .90.........100.....
Predicted Secondary structure 

..





.....
..






Query SS confidence 











. .













. . . . .




















. .
















Query Sequence  QFKVLCSIRCAA. . CITPVELKKVLSVD. . . . . LGALTRMLDRLVCKGWVERLP. . NPNDKRGVLVKLTTGGA
Query Conservation     

  
    ..  
   

    
 .....  


  
  
   
 
 
  ..   
 
   
 

  
 
Alig confidence 











..













.....




















..
















Template Conservation 




  
   
  
 
  


              
 



 
   


                  
    
Template Sequence  ELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCK
Template Known Secondary structure  TTTT

B
T
TT


TTTTS
TTS

GGGG
Template Predicted Secondary structure 




































Template SS confidence 








































































   38.40.........50.........60.........70.........80.........90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions