Job Description P27245 Confidence 96.44% Date Thu Jan 5 11:43:25 GMT 2012 Rank 179 Aligned Residues 89 % Identity 12% Template c3kccA_ PDB info PDB header:transcription Chain: A: PDB Molecule:catabolite gene activator; PDBTitle: crystal structure of d138l mutant of catabolite gene activator protein Resolution 1.66 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.												.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																							.	.	.													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	F	N	E	I	I	P	L	G	R	L	I	H	M	V	N	Q	K	K	D	R	L	L	N	E	Y	L	S	P	L	D	I	T	A	A	Q	.	.	.	F	K	V	L	C	S	I	R	C	A	A	C	.	.	.	.	.	.	.	.	.	.	.	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L
Query Conservation																																							.	.	.													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	I	Q	V	N	P	D	I	L	M	R	L	S	A	Q	M	A	R	R	L	Q	V	T	S	E	K	V	G	N	L	A	F	L	L	V	T	G	R	I	A	Q	T	L	L	N	L	A	K	Q	P	D	A	M	T	H	P	D	G	M	Q	I	K	I	T	R	Q	E	I	G	Q	I	V	G	C	S	R	E	T	V
Template Known Secondary structure								T																																										T	S	T	T					T	T																T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		G	R	I	L	K	M	L	E	D	Q	N	L	I	S	A	.	.	.	.	.	H	G	K	T	I	V	V	Y
Template Known Secondary structure											T	T	S				.	.	.	.	.		S	S
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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