Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence95.81%DateThu Jan 5 11:43:25 GMT 2012
Rank206Aligned Residues51
% Identity14%Templatec3k69A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50... ......60.........70.........80.........90...
Predicted Secondary structure 

..











Query SS confidence 










. .







































Query Sequence  FKVLCSIRCAA. . CITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDK
Query Conservation    

  
    ..  
   

    
   


  
  
   
 
 
     
 
Alig confidence 










..







































Template Conservation 
  
  

       

  

    
    
 


  
 




 
  
  

Template Sequence  VHSILYLDAHRDSKVASRELAQSLHLNPVXIRNILSVLHKHGYLTGTVGKNGG
Template Known Secondary structure  TTTTS
B
TS
GGGTTTSS
STT
Template Predicted Secondary structure 


















Template SS confidence 




















































   14.....20.........30.........40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions