Job Description P27245 Confidence 97.92% Date Thu Jan 5 11:43:25 GMT 2012 Rank 99 Aligned Residues 73 % Identity 18% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	Q	F	K	V	L	C	S	I	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K	L	T	T	G	G	A	A	I	C	E	Q	C	H	Q	L	V
Query Conservation
Alig confidence															.																																						.	.	.
Template Conservation															.																																						.	.	.
Template Sequence		N	E	R	R	L	Q	I	L	C	X	L	H	N	.	Q	E	L	S	V	G	E	L	C	A	K	L	Q	L	S	Q	S	A	L	S	Q	H	L	A	W	L	R	R	D	G	L	V	T	T	R	K	E	.	.	.	A	Q	T	V	Y	Y	T	L	K	S	E	E	V	K	A	X	I	K	L	L	H	S	L
Template Known Secondary structure		S										T	T	T	.	S												T																T	T	S							.	.	.	T	T
Template Predicted Secondary structure															.																																						.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions