Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence98.66%DateThu Jan 5 11:43:25 GMT 2012
Rank72Aligned Residues83
% Identity23%Templatec3hhhA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, padr family; PDBTitle: crystal structure of transcriptional regulator, a member of padr2 family, from enterococcus faecalis v583
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60..... ....70.........80.........90.........100.........110..
Predicted Secondary structure 






......









Query SS confidence 


























. . . . . .














































Query Sequence  TAAQFKVLCSIRCAACITPVELKKVLS. . . . . . VDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCH
Query Conservation 
     

  
      
   

    ......
   


  
  
   
 
 
     
 
   
 

  
        
Alig confidence 












.












......














































Template Conservation 
 
   

  
  .    

 
   
       

 
 

  
 


  
 
          

 
 

  
   
    
Template Sequence  GILEGLVLAIIQR. KETYGYEITKILNDQGFTEIVEGTVYTILLRLEKNQWVIAEKKPSEPXRKFYRLTSSGEAELADFW
Template Known Secondary structure  T.S
B
TTS
SS

TTS



Template Predicted Secondary structure 
.





















Template SS confidence 















































































   910.........20. ........30.........40.........50.........60.........70.........80.......
 
   113......120...
Predicted Secondary structure 
Query SS confidence 










Query Sequence  QLVGQDLHQEL
Query Conservation             
Alig confidence 




.




Template Conservation       .    
Template Sequence  QRWTL. LSKQV
Template Known Secondary structure  .
Template Predicted Secondary structure  .
Template SS confidence 










   90.... .....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions