Job Description P27245 Confidence 97.86% Date Thu Jan 5 11:43:25 GMT 2012 Rank 100 Aligned Residues 85 % Identity 18% Template c3elkA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative transcriptional regulator ta0346; PDBTitle: crystal structure of putative transcriptional regulator ta0346 from2 thermoplasma acidophilum Resolution 1.70 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																	.																.	.
Query SS confidence																							.	.	.	.	.	.																																	.																.	.
Query Sequence		Q	F	K	V	L	C	S	I	R	C	A	A	C	I	T	P	V	E	L	K	K	.	.	.	.	.	.	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	.	G	V	L	V	K	L	T	T	G	G	A	A	I	C	E	.	.	Q	C	H
Query Conservation																							.	.	.	.	.	.																																	.																.	.
Alig confidence														.									.	.	.	.	.	.																																	.																.	.
Template Conservation														.
Template Sequence		T	L	Y	I	L	K	E	L	V	K	R	P	.	X	H	G	Y	E	L	Q	K	S	X	F	E	T	T	G	Q	A	L	P	Q	G	S	I	Y	I	L	L	K	T	X	K	E	R	G	F	V	I	S	E	S	S	V	N	K	G	Q	Q	L	T	V	Y	H	I	T	D	A	G	K	K	F	L	D	H	S	Q	A	L
Template Known Secondary structure												S		.															S					T	T													T	S																													S	T	T
Template Predicted Secondary structure														.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	G	Q	D	L	H	Q	E	L	T	K	N	L	T
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		Q	L	A	R	K	I	I	D	D	.	L	L	S	T	V	D
Template Known Secondary structure											.			T	T
Template Predicted Secondary structure											.
Template SS confidence
		97	.	.	100	.	.	.	.	.		.	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions