Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence87.74%DateThu Jan 5 11:43:25 GMT 2012
Rank314Aligned Residues42
% Identity17%Templatec3cloC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of putative transcriptional regulator containing a2 luxr dna binding domain (np_811094.1) from bacteroides3 thetaiotaomicron vpi-5482 at 2.04 a resolution
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.
Predicted Secondary structure 









Query SS confidence 











































Query Sequence  ITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCK
Query Conservation 

     

  
      
   

    
   


  
  
   
Alig confidence 












..




























Template Conservation 

  
  

    .. 
     

  
 

  

         
Template Sequence  LSEREKEILRCIR. . KGLSSKEIAATLYISVNTVNRHRQNILEK
Template Known Secondary structure  S
..T

TT

Template Predicted Secondary structure 

..






Template SS confidence 











































   197..200......... 210.........220.........230........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions