Job Description P27245 Confidence 99.85% Date Thu Jan 5 11:43:25 GMT 2012 Rank 34 Aligned Residues 131 % Identity 21% Template c3boqB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, marr family; PDBTitle: crystal structure of marr family transcriptional regulator from2 silicibacter pomeroyi Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																															.																					.
Query SS confidence																															.																					.
Query Sequence		S	D	L	F	N	E	I	I	P	L	G	R	L	I	H	M	V	N	Q	K	K	D	R	L	L	N	E	Y	L	.	S	P	L	D	I	T	A	A	Q	F	K	V	L	C	S	I	R	C	A	A	.	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G
Query Conservation																															.																					.
Alig confidence																															.																					.
Template Conservation
Template Sequence		S	D	R	Q	Q	N	Q	T	R	L	W	L	N	I	L	R	L	H	G	L	V	F	G	D	L	N	R	Q	L	L	D	E	T	G	L	S	L	A	K	F	D	A	X	A	Q	L	A	R	N	P	D	G	L	S	X	G	K	L	S	G	A	L	K	V	T	N	G	N	V	S	G	L	V	N	R	L	I	K	D	G
Template Known Secondary structure																																			S																T	T												S	S			S												T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K	L	T	T	G	G	A	A	I	C	E	Q	C	H	Q	L	V	G	Q	D	L	H	Q	E	L	T	K	N	L	T	A	D	E	V	A	T	L	E	Y	L	L	K	K	V	L
Query Conservation
Alig confidence				.	.	.	.	.	.	.																											.
Template Conservation				.	.	.	.	.	.	.																											.
Template Sequence		X	V	.	.	.	.	.	.	.	V	K	A	S	F	S	A	K	L	T	D	A	G	L	T	T	F	K	Q	A	S	E	A	H	N	R	.	I	L	A	E	L	L	R	A	V	S	D	Q	D	X	V	E	A	S	A	A	L	R	G	I	L
Template Known Secondary structure		S	B	.	.	.	.	.	.	.									B																		.						T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.																											.
Template SS confidence
		88	.								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions