Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence55.71%DateThu Jan 5 11:43:25 GMT 2012
Rank487Aligned Residues28
% Identity21%Templatec3b81A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, acrr family; PDBTitle: crystal structure of predicted dna-binding transcriptional regulator2 of tetr/acrr family (np_350189.1) from clostridium acetobutylicum at3 2.10 a resolution
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50... ......60.........70.
Predicted Secondary structure 

..





Query SS confidence 









. .

















Query Sequence  KVLCSIRCAA. . CITPVELKKVLSVDLGAL
Query Conservation   

  
    ..  
   

    
   

Alig confidence 









..

















Template Conservation 

  
    
    

  

  



  
 
Template Sequence  KIWDIFIANGYENTTLAFIINKLGISKGAL
Template Known Secondary structure 
STT

T

Template Predicted Secondary structure 









Template SS confidence 





























   18.20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions