Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence57.02%DateThu Jan 5 11:43:25 GMT 2012
Rank482Aligned Residues46
% Identity17%Templatec2xzm7_
PDB info PDB header:ribosomeChain: 7: PDB Molecule:plectin/s10 domain containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1
Resolution3.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110..
Predicted Secondary structure 










Query SS confidence 
















































Query Sequence  LSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCH
Query Conservation    
   


  
  
   
 
 
     
 
   
 

  
        
Alig confidence 

























...



















Template Conservation    



 
 
 
 

 


 
 
 
 ...
   
  

 


 


 

Template Sequence  TGVPNLHCYILVRSLKDRGFLEEIFN. . . WGFTYYYLNKEGCEYLKTKL
Template Known Secondary structure  T

BTS...TT
Template Predicted Secondary structure 



...
Template SS confidence 
















































   35....40.........50.........60 .........70.........80
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions