Job Description P27245 Confidence 97.74% Date Thu Jan 5 11:43:25 GMT 2012 Rank 109 Aligned Residues 88 % Identity 18% Template c2v79B_ PDB info PDB header:dna-binding protein Chain: B: PDB Molecule:dna replication protein dnad; PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.							.	.																																	.	.
Query SS confidence																									.	.	.							.	.																																	.	.
Query Sequence		R	L	L	N	E	Y	L	S	P	L	D	I	T	A	A	Q	F	K	V	L	C	S	I	.	.	.	R	C	A	A	C	I	.	.	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	.	.	P	N	P	N	D	K	R	G	V	L	V	K
Query Conservation																									.	.	.							.	.																																	.	.
Alig confidence																									.	.	.							.	.																																	.	.
Template Conservation
Template Sequence		N	L	L	L	T	H	Y	K	Q	L	G	L	N	E	T	E	L	I	L	L	L	K	I	K	M	H	L	E	K	G	S	Y	F	P	T	P	N	Q	L	Q	E	G	M	S	I	S	V	E	E	C	T	N	R	L	R	M	F	I	Q	K	G	F	L	F	I	E	E	C	E	D	Q	N	G	I	K	F	E	K	Y	S
Template Known Secondary structure												T																	T	T	T			S								T	T	S	S	S																T	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	G	G	A	A	I	C	E	Q	C	H	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	P	L	W	G	K	L	Y	E	Y	I	Q	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions