Job Description P27245 Confidence 89.60% Date Thu Jan 5 11:43:25 GMT 2012 Rank 299 Aligned Residues 89 % Identity 12% Template c2pjpA_ PDB info PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	F	K	V	L	C	S	I	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K	L	T	T	G	G	A	A	I	C	E	Q	C	H	Q	L	V	G	Q	D	L	H
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.								.	.	.
Template Conservation																																																			.	.	.	.	.	.	.								.	.	.
Template Sequence		A	I	W	Q	K	A	E	P	L	F	G	D	E	P	W	W	V	R	D	L	A	K	E	T	G	T	D	E	Q	A	M	R	L	T	L	R	Q	A	A	Q	Q	G	I	I	T	A	I	V	K	.	.	.	.	.	.	.	D	R	Y	Y	R	N	D	.	.	.	R	I	V	E	F	A	N	M	I	R	D	L	D	Q
Template Known Secondary structure								G	G	G		S	S	S											T	T																T	T	S						T	.	.	.	.	.	.	.	T							.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.								.	.	.
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.								.	.	.	.	.	.	.				.	550	.	.	.	.	.	.	.	.	.	560	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	T	K	N	L	T	A	D	E	V	A	T	L	E	Y	L	L	K	K
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		E	.	.	C	G	S	T	C	A	A	D	F	R	D	R	L	G	V	G	R	K
Template Known Secondary structure			.	.		S	S											T	S
Template Predicted Secondary structure			.	.
Template SS confidence
		563			.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions