Job Description P27245 Confidence 98.13% Date Thu Jan 5 11:43:25 GMT 2012 Rank 84 Aligned Residues 91 % Identity 12% Template c2kkoB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:possible transcriptional regulatory protein PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e. Resolution UNK

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	K	D	R	L	L	N	E	Y	L	S	P	L	D	I	T	A	A	Q	F	K	V	L	C	S	I	R	C	A	A	C	I	T	P	V	E	L	K	K	V	L	S	V	D	L	G	A	L	T	R	M	L	D	R	L	V	C	K	G	W	V	E	R	L	P	N	P	N	D	K	R	G	V	L	V	K	L	T	T
Query Conservation
Alig confidence																	.														.																																						.	.	.
Template Conservation																	.														.																																						.	.	.
Template Sequence		A	A	L	L	D	Q	V	A	R	V	G	K	A	L	A	.	N	G	R	R	L	Q	I	L	D	L	L	A	Q	.	G	E	R	A	V	E	A	I	A	T	A	T	G	M	N	L	T	T	A	S	A	N	L	Q	A	L	K	S	G	G	L	V	E	A	R	R	E	.	.	.	G	T	R	Q	Y	Y	R	I	A	G
Template Known Secondary structure																T	.												T	T	.													T																	T	S							.	.	.	T	T							S
Template Predicted Secondary structure																	.														.																																						.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	A	A	I	C	E	Q	C	H	Q	L	V	G	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	V	A	R	L	F	A	L	V	Q	V	V	A	D	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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