Return to main results Retrieve Phyre Job Id

Job DescriptionP27245
Confidence81.38%DateThu Jan 5 11:43:25 GMT 2012
Rank371Aligned Residues29
% Identity14%Templatec1y9qA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, hth_3 family; PDBTitle: crystal structure of hth_3 family transcriptional regulator2 from vibrio cholerae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70....
Predicted Secondary structure 







Query SS confidence 




























Query Sequence  LCSIRCAACITPVELKKVLSVDLGALTRM
Query Conservation 
  
      
   

    
   


  
Alig confidence 




























Template Conservation 

 

   


  


   


   

 
Template Sequence  LKNLRKSRGLSLDATAQLTGVSKAXLGQI
Template Known Secondary structure  TT

SS
Template Predicted Secondary structure 






Template SS confidence 




























   16...20.........30.........40....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions