Return to main results Retrieve Phyre Job Id

Job DescriptionP60566
Confidence21.90%DateThu Jan 5 12:06:54 GMT 2012
Rank196Aligned Residues84
% Identity14%Templated1vcfa1
SCOP infoTIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90...... ...100.........110.........120..
Predicted Secondary structure 


















.







Query SS confidence 




















































.

























Query Sequence  AACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQAL. PQQTASALAAAAQKAGFDLILCGDGS
Query Conservation   

 


  
   
 


 
         

 


 


  
 
 
      
.    
  

  
     



 
  
Alig confidence 









.















..























.

























Template Conservation    
       .  
 

 




 
 
..
 






  
 


        
  

   
  
  

   
 
 
   
Template Sequence  RAILEVREVL. PHLPLVASGGVYTGTD. . GAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALFAIGARN
Template Known Secondary structure 
.SSS
SS

S..T
S
GGGTT
T
SS
Template Predicted Secondary structure 
.







..








Template SS confidence 















































































   245....250.... .....260.........270 .........280.........290.........300.........310.........320.
 
   123......130
Predicted Secondary structure 




Query SS confidence 







Query Sequence  SDLYAQQV
Query Conservation   
   
 
Alig confidence 







Template Conservation 
 

    
Template Sequence  PKEARGRV
Template Known Secondary structure  GGGGTT
Template Predicted Secondary structure 
Template SS confidence 







   322.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions