Return to main results Retrieve Phyre Job Id

Job DescriptionP60566
Confidence60.67%DateThu Jan 5 12:06:54 GMT 2012
Rank62Aligned Residues101
% Identity14%Templated1hg3a_
SCOP infoTIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM)
Resolution2.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20........ .30.........40.........50.........60.........70...
Predicted Secondary structure 











.......













Query SS confidence 



























. . . . . . .












































Query Sequence  MKIITCYKCVPDEQDIAVNNADGSLDFS. . . . . . . KADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGR
Query Conservation 
 
 
 

 


            
   .......     

  
  


 

 


  
   
 


 
         
Alig confidence 





...


















.......
























.















..
Template Conservation 
  


...


  
          





 





                      .  
 






 
  
.. 
Template Sequence  LMTMVC. . . SNNPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVN. PEVKVLCGAGISTGED. . V
Template Known Secondary structure 
...SSTT

S

TTTTTTS

TTTS
T
.TTSSS

S..
Template Predicted Secondary structure 
...





















.






..
Template SS confidence 















































































   118.120... ......130.........140.........150.........160.........170.... .....180.........190 .
 
   74.....80.........90.........100........
Predicted Secondary structure 











Query SS confidence 


































Query Sequence  KDVLSRGPDELIVVIDDQFEQALPQQTASALAAAA
Query Conservation 
 


 


  
 
 
      
    
  

  
Alig confidence 








.
























Template Conservation        


.






 


 

   
  

   
Template Sequence  KKAIELGTV. GVLLASGVTKAKDPEKAIWDLVSGI
Template Known Secondary structure  TT
S.ST
SST
Template Predicted Secondary structure 



.








Template SS confidence 


































   192.......200 .........210.........220.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions