Job Description P60566 Confidence 40.32% Date Thu Jan 5 12:06:54 GMT 2012 Rank 104 Aligned Residues 94 % Identity 20% Template c3vh3A_ PDB info PDB header:metal binding protein/protein transport Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: crystal structure of atg7ctd-atg8 complex Resolution 2.00 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.													.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		Q	Q	A	A	E	A	Q	V	T	A	L	S	V	G	G	K	A	L	T	N	A	K	G	R	K	D	V	L	S	R	G	P	D	E	L	I	V	V	I	D	D	Q	F	E	Q	A	L	P	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	T	A	S	A	L	A	A	A	A	Q	K	A	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence																							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																							.	.	.
Template Sequence		D	I	I	K	N	T	K	V	L	L	L	G	A	G	T	L	G	C	Y	V	S	.	.	.	R	A	L	I	A	W	G	V	R	K	I	T	F	V	D	N	G	T	V	S	Y	S	N	P	V	R	Q	A	L	Y	N	F	E	D	C	G	K	P	K	A	E	L	A	A	A	S	L	K	R	I	F	P	L	M	D	A
Template Known Secondary structure						T									S								.	.	.						T	T											B			T	T	S	T	T	T	S	T	T			G	G	G	T	T	S	B														T	T
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
																																		112	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	D	L	I	L	C	G	D	G	S	S	D	L	.	Y	A	Q	Q	V	G	L	L	V	G	E	I	L	N	I	P	A	V	N	G	V	S	K	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.					.
Template Conservation																																									.	.	.
Template Sequence		T	G	V	K	L	S	I	P	M	I	G	H	K	L	V	N	E	E	A	Q	H	K	D	F	D	R	L	R	A	L	I	K	E	H	D	I	I	F	L	.	.	.	L	V	D	S	R	E	S	R	W	L	P	S	L	L	S	N	I	E	N	K	T	V	I	N	A	A	L	G	F
Template Known Secondary structure											T	T	S			S																				S					.	.	.			S	S	T	G	G	G										T	T										S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.				.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions