Job Description P60566 Confidence 83.77% Date Thu Jan 5 12:06:54 GMT 2012 Rank 25 Aligned Residues 135 % Identity 10% Template c3lpnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of the phosphoribosylpyrophosphate (prpp) synthetase2 from thermoplasma volcanium in complex with an atp analog (ampcpp). Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.												.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure												.																																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	C	Y	K	C	V	P	D	E	Q	.	D	I	A	V	N	N	A	D	G	S	L	D	F	S	K	A	D	A	K	I	S	Q	Y	D	L	N	A	I	E	A	A	C	Q	L	K	Q	Q	A	A	E	A	Q	V	T	A	L	S	.	.	.	.	.	.	.	.	.	.	.	V	G	G	K	A	L	T	N	A	K	G
Query Conservation												.																																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	E	R	R	F	P	D	G	E	L	Y	L	R	Y	D	E	D	L	T	G	H	N	I	F	I	I	G	N	T	H	S	D	A	E	V	M	E	M	I	L	T	L	S	A	I	Q	D	Y	R	T	K	S	V	N	I	I	A	P	Y	Y	G	Y	A	R	Q	H	Q	R	Y	K	N	G	E	P	I	S	S	Q	I
Template Known Secondary structure								T	T	S								S			T	T	S										S														G	G	G	S			S							S	S		T	T	T	T			S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																		.	.													.	.	.	.	.
Query SS confidence																		.	.													.	.	.	.	.
Query Sequence		R	K	D	V	L	S	R	G	P	D	E	L	I	V	V	I	.	.	D	D	Q	F	E	Q	A	L	P	Q	Q	T	.	.	.	.	.	A	S	A	L	A	A	A	A	Q	K	A	G	F	D	L	I	L	C	G	D	G	S	S	D	L	Y	A	Q	Q	V	G	L	L	V	G	E	I	L	N	I	P	A	V
Query Conservation																		.	.													.	.	.	.	.
Alig confidence																		.	.													.	.	.	.	.																			.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		L	T	E	I	Y	S	S	Y	S	N	S	I	A	T	V	D	I	H	D	E	K	T	L	S	Y	S	K	V	K	F	S	D	L	H	A	N	D	A	I	V	R	Y	Y	K	N	V	D	V	D	Y	V	V	S	.	.	.	.	P	D	D	G	G	L	A	R	V	A	D	I	S	A	K	L	G	K	K	H	F
Template Known Secondary structure									T		S						S		S	S	G	G	G	G	G	G		S	S																T	T	S			S					.	.	.	.	S	S	S	S	S												T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions