Job Description P60566 Confidence 99.93% Date Thu Jan 5 12:06:54 GMT 2012 Rank 7 Aligned Residues 175 % Identity 16% Template c3ih5A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:electron transfer flavoprotein alpha-subunit; PDBTitle: crystal structure of electron transfer flavoprotein alpha-2 subunit from bacteroides thetaiotaomicron Resolution 2.60 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	Q	Y	D	L	N	A	I	E	A	A	C	Q	L	K	Q	Q	A	A	E	A	Q	V	T	A	L	S	V	G	G	K	A	L	T	N	A	K	G	R	K	D	V	L	S	R	G	P	D	E	L	I	V	V	I	D	D	Q	F	E	Q	A	L	P	Q	Q	T	A	S	A	L	A	A	A	A	Q	K	A	G	F
Query Conservation
Alig confidence																						.												.					.	.
Template Conservation																						.												.					.	.
Template Sequence		V	A	D	V	S	L	E	L	L	T	K	G	R	S	L	A	N	E	L	N	.	C	Q	L	E	A	V	V	A	G	T	G	.	L	K	E	I	.	.	E	K	Q	I	L	P	Y	G	V	D	K	L	H	V	F	D	A	E	G	L	Y	P	Y	T	S	L	P	H	T	S	I	L	V	N	L	F	K	E	E	Q	P
Template Known Secondary structure																					T	.										S		.		T	T	T	.	.					G	G	G	T		S								G	G	G	S	S
Template Predicted Secondary structure																						.												.					.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.		.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.												.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		D	L	I	L	C	G	D	G	S	S	D	L	Y	A	Q	Q	V	G	L	L	V	G	E	I	L	N	I	P	A	V	N	G	V	S	K	I	I	S	L	T	A	D	T	.	.	.	.	.	.	.	.	.	.	.	L	T	V	E	R	E	L	E	D	E	T	E	T	L	S	I	P	L	.	.	.	.	P	A	V	V
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence															.	.	.																					.							.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation															.	.	.																					.
Template Sequence		Q	I	C	L	X	G	A	T	V	I	G	R	D	.	.	.	L	G	P	R	V	S	S	A	L	T	S	G	L	T	A	D	C	T	S	L	.	E	I	G	D	H	E	D	K	K	E	G	K	V	Y	K	N	L	L	Y	Q	I	R	P	A	F	G	G	N	I	V	A	T	I	V	N	P	E	H	R	P	Q	X	A
Template Known Secondary structure		S							S						.	.	.									T	T				B		S		S			.								T	T	T	T													S	S	S	S	S								S	S	S	S	S
Template Predicted Secondary structure															.	.	.																					.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	T	D	I	N	S	P	Q	I	P	S	M	K	A	I	L	G	A	A	K	K	P	V	Q	V	W	S	A	A	D	I	G	F	N	A	E	A	A	W	S	E
Query Conservation
Alig confidence															.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		T	V	R	E	G	V	X	K	K	E	I	V	S	.	.	.	.	.	P	A	Y	Q	G	E	V	I	R	H	D	V	K	K	Y	V	A	D	T	D	Y	V	V	K	V
Template Known Secondary structure					T	T	S	S					S		.	.	.	.	.	T	T															T	T	S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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