Job Description P60566 Confidence 65.54% Date Thu Jan 5 12:06:54 GMT 2012 Rank 47 Aligned Residues 136 % Identity 15% Template c3efhB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase 1; PDBTitle: crystal structure of human phosphoribosyl pyrophosphate2 synthetase 1 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.												.	.	.	.	.	.	.	.	70
Predicted Secondary structure												.																																					.	.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																					.	.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	C	Y	K	C	V	P	D	E	Q	.	D	I	A	V	N	N	A	D	G	S	L	D	F	S	K	A	D	A	K	I	S	Q	Y	D	L	N	A	I	E	A	A	C	Q	L	K	Q	.	.	Q	A	A	E	A	Q	V	T	A	L	S	.	.	.	.	.	.	.	.	.	.	.	V	G	G	K	A	L	T	N	A
Query Conservation												.																																					.	.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																					.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	T	K	K	F	S	N	Q	E	T	C	V	E	I	G	E	S	V	R	G	E	D	V	Y	I	V	Q	S	G	C	G	E	I	N	D	N	L	M	E	L	L	I	M	I	N	A	C	K	I	A	S	A	S	R	V	T	A	V	I	P	C	F	P	Y	A	R	Q	D	K	K	D	K	S	R	A	P	I	S	A
Template Known Secondary structure								T	T								S	S			B	T											S	S																		T	T	B	S							S	S		T	T	T	T			S		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.															.	.					.	.	.	.	.																				.	.	.
Query SS confidence									.															.	.					.	.	.	.	.																				.	.	.
Query Sequence		K	G	R	K	D	V	L	.	S	R	G	P	D	E	L	I	V	V	I	D	D	Q	.	.	F	E	Q	A	.	.	.	.	.	L	P	Q	Q	T	A	S	A	L	A	A	A	A	Q	K	A	G	F	D	.	.	.	L	I	L	C	G	D	G	S	S	D	L	Y	A	Q	Q	V	G	L	L	V	G	E	I	L	N
Query Conservation									.															.	.					.	.	.	.	.																				.	.	.
Alig confidence									.															.	.					.	.	.	.	.																				.	.	.					.	.	.
Template Conservation																																																													.	.	.
Template Sequence		K	L	V	A	N	M	L	S	V	A	G	A	D	H	I	I	T	M	D	L	H	A	S	Q	I	Q	G	F	F	D	I	P	V	D	N	L	Y	A	E	P	A	V	L	K	W	I	R	E	N	I	S	E	W	R	N	C	T	I	V	.	.	.	S	P	D	A	G	G	A	K	R	V	T	S	I	A	D	R	L	N
Template Known Secondary structure												T								S		S	S	G	G	G	G	G	G		S	S							S													T	T	G	G	G					.	.	.		S	S	G	G	G												T
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	F	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions