Job Description P60566 Confidence 68.04% Date Thu Jan 5 12:06:54 GMT 2012 Rank 43 Aligned Residues 107 % Identity 15% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.																						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																													.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	C	Y	K	C	V	P	D	E	Q	D	I	A	V	N	N	A	D	G	S	L	D	F	S	K	A	D	.	.	A	K	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	D	L	N	A	I	E	A	A	C	Q	L	K	Q	Q	A	A	E	A	Q	V	T	A	L	S
Query Conservation																													.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																																										.
Template Sequence		V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	.	K	Q	I	P	I	I	A
Template Known Secondary structure								S																	T	T		S								B	S						G	G	G	T	T			S																						T	T	.	T		S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.		.	.	500	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		V	G	G	K	A	L	T	N	A	K	G	R	K	D	V	L	S	R	G	P	D	E	L	I	V	V	I	D	D	Q	F	E	Q	A	L	.	P	Q	Q	T	A	S	A	L	A	A	A	A	Q	K	A	G	F	D
Query Conservation																																					.
Alig confidence											.	.																									.
Template Conservation											.	.
Template Sequence		S	G	G	I	F	S	G	L	D	.	.	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q	R	G	Y	Y
Template Known Secondary structure			S	S			S				.	.							T	T							S							G	G	G																	T		S
Template Predicted Secondary structure											.	.
Template SS confidence
		505	.	.	.	.	510	.	.	.			.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions