Job Description P60566 Confidence 99.95% Date Thu Jan 5 12:06:54 GMT 2012 Rank 5 Aligned Residues 165 % Identity 16% Template c1o94D_ PDB info PDB header:electron transport Chain: D: PDB Molecule:electron transfer flavoprotein alpha-subunit; PDBTitle: ternary complex between trimethylamine dehydrogenase and2 electron transferring flavoprotein Resolution 2.0 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	Q	Y	D	L	N	A	I	E	A	A	C	Q	L	K	Q	Q	A	A	E	A	Q	V	T	A	L	S	V	G	G	K	A	L	T	N	A	K	G	R	K	D	V	L	S	R	G	P	D	E	L	I	V	V	I	D	D	Q	F	E	Q	A	L	P	Q	Q	T	A	S	A	L	A	A	A	A	Q	K	A	G	F
Query Conservation
Alig confidence																						.																.	.	.																					.
Template Conservation																						.																.	.	.																					.
Template Sequence		L	R	P	V	S	L	E	L	I	G	A	A	N	G	L	K	K	S	G	E	.	D	K	V	V	V	A	V	I	G	S	Q	A	D	A	F	.	.	.	V	P	A	L	S	V	N	G	V	D	E	L	V	V	V	K	G	S	S	I	.	D	F	D	P	D	V	F	E	A	S	V	S	A	L	I	A	A	H	N	P
Template Known Secondary structure				T											T	T		S	S	T	T	.									S	T	T	G	G	G	G	.	.	.						B	T	T		S								S		S	.	S
Template Predicted Secondary structure																						.																.	.	.																					.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		D	L	I	L	C	G	D	G	S	S	D	L	Y	A	Q	Q	V	G	L	L	V	G	E	I	L	N	I	P	A	V	N	G	V	S	K	I	I	S	L	T	A	D	T	L	T	V	E	R	E	L	E	D	E	T	E	T	L	S	I	P	L	.	.	.	.	P	A	V	V	A	V	S	T	D	I	N	S	P	Q	I
Query Conservation																																																															.	.	.	.
Alig confidence															.	.	.																					.																									.	.	.	.
Template Conservation															.	.	.																					.
Template Sequence		S	V	V	L	L	P	H	S	V	D	S	L	G	.	.	.	Y	A	S	S	L	A	S	K	T	G	Y	G	F	A	T	D	V	Y	I	V	.	E	Y	Q	G	D	E	L	V	A	T	R	G	G	Y	N	Q	K	V	N	V	E	V	D	F	P	G	K	S	T	V	V	L	T	I	R	P	S	V	F	K	P	L	E
Template Known Secondary structure		S							S					T	.	.	.	T							T	T	T											.				T	T									T	T	T	T								T	T		S								T	T	S	S
Template Predicted Secondary structure															.	.	.																					.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	M	K	A	I	L	G	A	A	K	K	P	V	Q	V	W	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	G	S	P	V	V	S	N	V	D	A	P	S	V	Q	S	R
Template Known Secondary structure		S	B																S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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