Return to main results Retrieve Phyre Job Id

Job DescriptionP08142
Confidence100.00%DateThu Jan 5 11:00:40 GMT 2012
Rank39Aligned Residues189
% Identity23%Templated2ihta3
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  IPKACDPLSHYGLINAVAAC. . . . . VDDNAIITTDVGQHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPD
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Template Sequence  PETYEDGXRVHQVIDSXNTVXEEAAEPGEGTIVSDIGFFRHYGVLFARADQPFGFLTSAGCSSFGYGIPAAIGAQXARPD
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SSSB
S
TT


SS



STTS

SSS

TT
STT
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   375....380.........390.........400.........410.........420.........430.........440.........450....
 
   436...440.........450.........460.........470.........480.........490.........500.........510.....
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Query Sequence  RKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFGLETCDLN
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Template Sequence  QPTFLIAGDGGFHSNSSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHRSHDPAVKFGGVDFVALAEANGVDATRAT
Template Known Secondary structure  S
TGGGT



SB
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GGGTB




TT


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   455....460.........470.........480.........490.........500.........510.........520.........530....
 
   516...520.........530.........540.........
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Query Sequence  NEADPQASLQEIINRPGPALIHVRIDAEEKVYPM
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Template Sequence  NREELLAALRKGAELGRPFLIEVPVNYDFQPGGF
Template Known Secondary structure  STSSS
B




GGG
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   535....540.........550.........560........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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