Job Description P08142 Confidence 96.06% Date Thu Jan 5 11:00:40 GMT 2012 Rank 117 Aligned Residues 166 % Identity 15% Template d2ieaa1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.85

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																						.	.	.	.			.	.																									.	.	.	.	.	.	.	.						.
Query SS confidence																						.	.	.	.			.	.																									.	.	.	.	.	.	.	.						.
Query Sequence		T	S	T	R	K	R	F	T	G	A	E	F	I	V	H	F	L	E	Q	Q	.	.	.	.	G	I	.	.	K	I	V	T	G	I	P	G	G	S	I	L	P	V	Y	D	A	L	S	Q	S	T	Q	I	.	.	.	.	.	.	.	.	R	H	I	L	A	.	R	H	E	Q	G	A	G	F	I	A	Q	G	M	A
Query Conservation																						.	.	.	.			.	.																									.	.	.	.	.	.	.	.						.
Alig confidence																						.	.	.	.			.	.																									.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		E	E	Q	S	K	E	I	S	T	T	I	A	F	V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	E	D	E	K	G	Q	I	L	Q	E	G	I	N	E	L	G	A	G	C	S	W	L	A	A	A
Template Known Secondary structure		S			S	S		B														T	T		T	T	T	G	G	G						S	S		S	G	G	G	T										B	B				B	T	T			B					S
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
		72	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.
Predicted Secondary structure							.	.	.	.	.																				.																											.														.
Query SS confidence							.	.	.	.	.																				.																											.														.
Query Sequence		R	T	D	G	K	.	.	.	.	.	P	A	V	C	M	A	C	S	G	P	G	A	T	N	L	V	T	A	I	.	A	D	A	R	L	D	S	I	P	L	I	C	I	T	G	Q	V	P	A	S	M	I	G	T	D	A	.	F	Q	E	V	D	T	Y	G	I	S	I	P	I	.	T	K	H	N	Y	L	V	R	H
Query Conservation							.	.	.	.	.																				.																											.														.
Alig confidence							.	.	.	.	.																				.																											.														.
Template Conservation
Template Sequence		T	S	Y	S	T	N	N	L	P	M	I	P	F	Y	I	Y	Y	S	M	F	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L	N	G	E	G	L	Q	H	E	D	G	H	S	H	I	Q	S	L	T	I	P	N	C	I	S	Y	D	P	A	Y
Template Known Secondary structure		T					T	S											G	G	G	S														T	T			S						S		S	T	T	T	S	T	T	T		T	T	T			S							T	T	S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	E	L	P	Q	V	M	S	D	A	F	R	I	A	Q	S	G	R	P	G	P	V	W	I	D	I	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	E	V	A	V	I	M	H	D	G	L	E	R	M	Y	G	E	K	Q	E	N	V	Y	Y	Y	I	T	T
Template Known Secondary structure																		S	T	T
Template Predicted Secondary structure
Template SS confidence
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions