Job Description P08142 Confidence 97.16% Date Thu Jan 5 11:00:40 GMT 2012 Rank 102 Aligned Residues 171 % Identity 15% Template d1w85b1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.0

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.							.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																					.	.					.	.	.	.	.	.																								.
Query SS confidence																					.	.					.	.	.	.	.	.																								.
Query Sequence		R	F	T	G	A	E	F	I	V	H	F	L	E	Q	Q	G	I	K	I	.	.	V	T	G	I	.	.	.	.	.	.	P	G	G	S	I	L	P	V	Y	D	A	L	S	Q	S	T	Q	I	R	H	I	L	A	.	R	H	E	Q	G	A	G	F	I	A	Q	G	M	A	R	T	D	G	K	P	A	V	C	M	A
Query Conservation																					.	.					.	.	.	.	.	.																								.
Alig confidence																					.	.					.	.	.	.	.	.																								.																.
Template Conservation																																																																								.
Template Sequence		Q	M	T	M	V	Q	A	I	T	D	A	L	R	I	E	L	K	N	D	P	N	V	L	I	F	G	E	D	V	G	V	N	G	G	V	F	R	A	T	E	G	L	Q	A	E	F	G	E	D	R	V	F	D	T	P	L	A	E	S	G	I	G	G	L	A	I	G	L	A	L	.	Q	G	F	R	P	V	P	E	I
Template Known Secondary structure																					T	T						T	T		S	T	T			T	T	S	T	T	T	T							T	T	T						S															.	T	T						B
Template Predicted Secondary structure																																																																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																																				.
Query SS confidence																			.	.	.	.	.	.	.	.	.																																				.
Query Sequence		C	S	G	P	G	A	T	N	L	V	T	A	I	A	D	A	R	.	.	.	.	.	.	.	.	.	L	D	S	I	P	L	I	C	I	T	G	Q	V	P	A	S	M	I	G	T	D	A	F	Q	E	V	D	T	Y	G	I	S	I	P	I	.	T	K	H	N	Y	L	V	R	H	I	E	E	L	P	Q	V	M	S
Query Conservation																			.	.	.	.	.	.	.	.	.																																				.
Alig confidence																			.	.	.	.	.	.	.	.	.																.	.																			.
Template Conservation																																											.	.
Template Sequence		Q	F	F	G	F	V	Y	E	V	M	D	S	I	C	G	Q	M	A	R	I	R	Y	R	T	G	G	R	Y	H	M	P	I	T	I	R	S	P	F	G	G	G	.	.	V	H	T	P	E	L	H	S	D	S	L	E	G	L	V	A	Q	Q	P	G	L	K	V	V	I	P	S	T	P	Y	D	A	K	G	L	L	I
Template Known Secondary structure		S	S	G	G	G	G	G	G	T						T	T	G	G	G					T	T	T	S	S												S	S	.	.	S				T	T	S	S								T	T	S	T	T							S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	R	I	A	Q	S	G	R	P	G	P	V	W	I	D	I	P	K	D	V	Q	T	A	V	F	E	I	E	T	Q	P	A	M	A	E	K
Query Conservation
Alig confidence							.	.	.	.	.
Template Conservation							.	.	.	.	.
Template Sequence		S	A	I	R	D	.	.	.	.	.	N	D	P	V	I	F	L	E	H	L	K	L	Y	R	S	F	R	Q	E	V	P	E	G	E	Y	T	I	P
Template Known Secondary structure						S	.	.	.	.	.	S	S								T	T	T	S	S	S							S	S
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		159	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions