Job Description P08142 Confidence 96.55% Date Thu Jan 5 11:00:40 GMT 2012 Rank 110 Aligned Residues 162 % Identity 17% Template d1umdb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.90

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																				.	.	.	.																	.
Query SS confidence																				.	.	.	.																	.
Query Sequence		A	E	F	I	V	H	F	L	E	Q	Q	G	I	K	I	V	T	G	.	.	.	.	I	P	G	G	S	I	L	P	V	Y	D	A	L	S	Q	S	.	T	Q	I	R	H	I	L	A	R	H	E	Q	G	A	G	F	I	A	Q	G	M	A	R	T	D	G	K	P	A	V	C	M	A	C	S	G	P	G	A	T	N
Query Conservation																				.	.	.	.																	.
Alig confidence																				.	.	.	.																	.																													.
Template Conservation																																																																					.
Template Sequence		N	R	A	L	D	E	E	M	A	K	D	P	R	V	V	V	L	G	E	D	V	G	K	R	G	G	V	F	L	V	T	E	G	L	L	Q	K	Y	G	P	D	R	V	M	D	T	P	L	S	E	A	A	I	V	G	A	A	L	G	M	A	A	H	G	L	R	P	.	V	A	E	I	Q	F	A	D	Y	I	F	P
Template Known Secondary structure													T	T						T	T		S	T	T			T	T	S	T	T	T	T							T	T	T						S																T				.					S	S	G	G	G		G	G
Template Predicted Secondary structure																																																																					.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																							.
Query SS confidence											.	.	.	.	.	.	.	.	.																																							.
Query Sequence		L	V	T	A	I	A	D	A	R	.	.	.	.	.	.	.	.	.	L	D	S	I	P	L	I	C	I	T	G	Q	V	P	A	S	M	I	G	T	D	A	F	Q	E	V	D	T	Y	G	I	S	I	P	I	T	K	H	.	N	Y	L	V	R	H	I	E	E	L	P	Q	V	M	S	D	A	F	R	I	A	Q	S
Query Conservation											.	.	.	.	.	.	.	.	.																																							.
Alig confidence											.	.	.	.	.	.	.	.	.															.	.																							.																					.	.	.
Template Conservation																																		.	.																																												.	.	.
Template Sequence		G	F	D	Q	L	V	S	Q	V	A	K	L	R	Y	R	S	G	G	Q	F	T	A	P	L	V	V	R	M	P	S	G	G	.	.	G	V	R	G	G	H	H	H	S	Q	S	P	E	A	H	F	V	H	T	A	G	L	K	V	V	A	V	S	T	P	Y	D	A	K	G	L	L	K	A	A	I	R	D	.	.	.
Template Known Secondary structure		G							T	T	T	T					T	T	T	S	S												S	.	.	S	S	S		G	G	G	S	S									T	S	T	T								S															.	.	.
Template Predicted Secondary structure																																		.	.																																												.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	G	P	V	W	I	D	I	P	K	D	V	Q	T	A	V	F	E	I	E	T	Q	P
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	E	D	P	V	V	F	L	E	P	K	R	L	Y	R	S	V	K	E	E	V	P	E	E
Template Known Secondary structure		.	.	S	S								G	G	G	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions