Job Description P08142 Confidence 97.50% Date Thu Jan 5 11:00:40 GMT 2012 Rank 97 Aligned Residues 174 % Identity 17% Template d1qs0b1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.40

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.											.	.	.	.																									.
Query SS confidence																	.	.	.	.											.	.	.	.																									.
Query Sequence		T	R	K	R	F	T	G	A	E	F	I	V	H	F	L	.	.	.	.	E	Q	Q	G	I	K	I	V	T	G	.	.	.	.	I	P	G	G	S	I	L	P	V	Y	D	A	L	S	Q	S	T	Q	I	R	H	I	L	A	.	R	H	E	Q	G	A	G	F	I	A	Q	G	M	A	R	T	D	G	K	P	A	V
Query Conservation																	.	.	.	.											.	.	.	.																									.
Alig confidence																	.	.	.	.											.	.	.	.																									.
Template Conservation
Template Sequence		A	T	T	T	X	T	X	I	Q	A	L	R	S	A	X	D	V	X	L	E	R	D	D	N	V	V	V	Y	G	Q	D	V	G	Y	F	G	G	V	F	R	C	T	E	G	L	Q	T	K	Y	G	K	S	R	V	F	D	A	P	I	S	E	S	G	I	V	G	T	A	V	G	X	G	A	Y	G	L	R	P	V	V
Template Known Secondary structure																								T	T						T	T		S	S	S			T	T	S	T	T	T	T							T	T	T						S																T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.				.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure								.	.	.															.	.	.	.	.																																				.
Query SS confidence								.	.	.															.	.	.	.	.																																				.
Query Sequence		C	M	A	C	S	G	.	.	.	P	G	A	T	N	L	V	T	A	I	A	D	A	R	.	.	.	.	.	L	D	S	I	P	L	I	C	I	T	G	Q	V	P	A	S	M	I	G	T	D	A	F	Q	E	V	D	T	Y	G	I	S	I	P	I	.	T	K	H	N	Y	L	V	R	H	I	E	E	L	P	Q	V
Query Conservation								.	.	.															.	.	.	.	.																																				.
Alig confidence								.	.	.															.	.	.	.	.																.	.																			.
Template Conservation																																													.	.
Template Sequence		E	I	Q	F	A	D	Y	F	Y	P	A	S	D	Q	I	V	S	E	X	A	R	L	R	Y	R	S	A	G	E	F	I	A	P	L	T	L	R	X	P	C	G	G	G	.	.	I	Y	G	G	Q	T	H	S	Q	S	P	E	A	X	F	T	Q	V	C	G	L	R	T	V	X	P	S	N	P	Y	D	A	K	G	L
Template Known Secondary structure				S		G	G	G		G	G	G						T	T	T	T	T					T	T	T	S	S													S	.	.	S	S			S	S	S	S								T	T	S	T	T								S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	D	A	F	R	I	A	Q	S	G	R	P	G	P	V	W	I	D	I	P	K	D	V	Q	T	A	V	F	E	I	E	T	Q	P	A	M	A	E
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		L	I	A	S	I	E	C	.	.	.	.	.	D	D	P	V	I	F	L	E	P	K	R	L	Y	N	G	P	F	D	G	H	H	D	R	P	V	T	P
Template Known Secondary structure								S	.	.	.	.	.	S	S								G	G	G	S	S	S				S		S	S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions