Job Description P08142 Confidence 99.11% Date Thu Jan 5 11:00:40 GMT 2012 Rank 85 Aligned Residues 119 % Identity 20% Template d1qs0a_ SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.					.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.			.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																					.	.
Query SS confidence																							.	.	.	.																					.	.
Query Sequence		T	S	G	G	L	G	T	M	G	F	G	L	P	A	A	I	G	A	A	L	A	.	.	.	.	N	P	D	R	K	V	L	C	F	S	G	D	G	S	L	M	M	N	I	Q	.	.	E	M	A	T	A	S	E	N	Q	L	D	V	K	I	I	L	M	N	N	E	A	L	G	L	V	H	Q	Q	Q	S	L	F	Y
Query Conservation																							.	.	.	.																					.	.
Alig confidence																							.	.	.	.																					.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	F	T	I	S	G	N	L	A	T	Q	F	V	Q	A	V	G	W	A	X	A	S	A	I	K	G	D	T	K	I	A	S	A	W	I	G	D	G	A	T	A	E	S	D	F	H	T	A	L	T	F	A	H	V	Y	R	A	P	V	I	L	N	V	V	N	N	Q	W	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B					S	S	S	S																T	T											T	G	G	G	G	S														T											S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		486	.	.	.	490	.	.	.	.		.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.							.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure											.																						.	.	.	.	.	.
Query SS confidence											.																						.	.	.	.	.	.
Query Sequence		E	Q	G	V	F	A	A	T	Y	.	P	G	K	I	N	F	M	Q	I	A	A	G	F	G	L	E	T	C	D	L	N	.	.	.	.	.	.	N	E	A	D	P	Q	A	S	L	Q	E	I	I	N	R	P	G	P	A	L	I	H	V	R	I	D	A
Query Conservation											.																						.	.	.	.	.	.
Alig confidence											.																						.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	S	T	F	Q	A	I	A	G	G	E	S	T	T	F	A	G	R	G	V	G	C	G	I	A	S	L	R	V	D	G	N	D	F	V	A	V	Y	A	A	S	R	W	A	A	E	R	A	R	R	G	L	G	P	S	L	I	E	W	V	T	Y	R
Template Known Secondary structure			T	T			G	G	G	G	T	T	T	T			S	T						T	T								T	T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions