Return to main results Retrieve Phyre Job Id

Job DescriptionP08142
Confidence99.29%DateThu Jan 5 11:00:40 GMT 2012
Rank76Aligned Residues110
% Identity24%Templatec3uk1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:transketolase; PDBTitle: crystal structure of a transketolase from burkholderia thailandensis2 with an oxidized cysteinesulfonic acid in the active site
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   417..420.........430.... .....440.........450.. .......460.........470.........
Predicted Secondary structure 



..............





...







Query SS confidence 

















. . . . . . . . . . . . . .

















. . .


























Query Sequence  GTMGFGLPAAIGAALANP. . . . . . . . . . . . . . DRKVLCFSGDGSLMMNIQ. . . EMATASENQLDVKIILMNNEALGLVHQ
Query Conservation    

  
  



 

  ..............   

 
 




     ...

 

      
 





        
Alig confidence 

















..............










.

.


...

























.
Template Conservation 
 

  
  
 
 
 
                   
  




.  .

   



 
    
 


 
 
 
  


 .
Template Sequence  GPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDG. LM. EGISHEACSLAGTLKLNKLIALYDDNGISIDG.
Template Known Secondary structure 
STT
BTTB








.

.STT
TT
STT.
Template Predicted Secondary structure 















.

.













.
Template SS confidence 















































































   134.....140.........150.........160.........170...... .. .180.........190.........200.........210
 
   480.........490.........500.........510.... .....520.........530.........540
Predicted Secondary structure 





















...






Query SS confidence 


































. . .

























Query Sequence  QQSLFYEQGVFAATYPGKINFMQIAAGFGLETCDL. . . NNEADPQASLQEIINRPGPALIHVRI
Query Conservation                     
   

 
 
     
...    

  

  
    

 



 
Alig confidence  ...........























...

























Template Conservation  ...........                 
       

 
   
  

  
     
  
   
Template Sequence  . . . . . . . . . . . DVVNWFHDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAKAKRSDKPSLICCKT
Template Known Secondary structure  ...........GGGT



TT
TT
TT
SS

Template Predicted Secondary structure  ...........














Template SS confidence 































































   212.......220.........230.........240.........250.........260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions