 |
Job Description | P08142 | Confidence | 98.95% | Date | Thu Jan 5 11:00:40 GMT 2012 |
Rank | 86 | Aligned Residues | 116 |
% Identity | 20% | Template | c3ahhA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:xylulose 5-phosphate/fructose 6-phosphate phosphoketolase; |
PDBTitle: h142a mutant of phosphoketolase from bifidobacterium breve complexed2 with acetyl thiamine diphosphate
|
Resolution | 2.10 Å |
|
 |
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | G | T | M | G | F | G | L | P | A | A | I | G | A | A | L | A | N | P | D | R | K | V | L | C | F | S | G | D | G | S | L | M | M | N | I | . |
. |
. |
. |
. |
Q | E | M | A | T | A | S | E | N | Q | L | D | V | K | I | I | L | M | N | N | E | A | L | G | L | V | H | Q | Q | Q | S | L | F | Y | E | Q | G | V |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |
|
|
|
|   |
|
|   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   | . | . | . | . | . |   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
|
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|   |   |   |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
Template Sequence |   |
E | G | G | E | L | G | Y | A | L | S | H | A | Y | G | A | V | M | N | N | P | S | L | F | V | P | C | I | I | G | D | G | E | A | E | T | G | P | L | A | T | G | W | Q | S | N | K | L | V | N | P | R | T | D | G | I | V | L | P | I | L | H | L | N | G | Y | K | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | N | P |
Template Known Secondary structure |   |
|
| S | S | T | T |
|  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  |  |  | T | T | G | G | G | S |  |  |  |  |  |  | G | G | G | G | G | S | S |
| T | T | T | S |
|  |  |  |  |  |  |  |
|
| S | B | S | S | . | . | . | . | . | . | . | . | . | . | S | S | B |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
220 | . | . |
  |
  |   |
490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 520 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 530 | . | . | . | . | . | . | . | . | . | 540 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | A | A | T | Y | P | G | K | I | N | F | M | Q | I | A | A | G | F | G | L | E | T | C | D | L | . |
. |
. |
. |
. |
. |
N | N | E | A | D | P | Q | A | S | L | Q | E | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | N | R | P | G | P | A | L | I | H | V | R | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |
| . | . | . | . | . | . |   |   |   |   |
|
|   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|
|   |
|
|   |
|   |   |
|   |
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|
|
Template Sequence |   |
T | I | L | A | R | I | S | D | E | E | L | H | D | F | F | R | G | M | G | Y | H | P | Y | E | F | V | A | G | F | D | N | E | D | H | M | S | I | H | R | R | F | A | E | L | F | E | T | I | F | D | E | I | C | D | I | K | A | A | A | Q | T | D | D | M | T | R | P | F | Y | P | M | L | I | F | R | T |
Template Known Secondary structure |   |
|  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
|
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|