 |
Job Description | P08142 | Confidence | 26.58% | Date | Thu Jan 5 11:00:40 GMT 2012 |
Rank | 189 | Aligned Residues | 43 |
% Identity | 5% | Template | c2vm2C_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:thioredoxin h isoform 1.; |
PDBTitle: crystal structure of barley thioredoxin h isoform 12 crystallized using peg as precipitant
|
Resolution | 1.8 Å |
|
  |   |
509 | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | T | C | D | L | N | N | E | A | D | P | Q | A | S | L | Q | E | I | I | N | R | P | G | P | A | L | I | H | V | R | I | D | A | E | E | K | V | Y | P | M | V | P |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |
Template Sequence |   |
G | A | V | I | A | C | H | T | K | Q | E | F | D | T | H | M | A | N | G | K | D | T | G | K | L | V | I | I | D | F | T | A | S | W | C | G | P | C | R | V | I | A | P |
Template Known Secondary structure |   |
|
|
|  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |
| T | T |
| S | G | G | G | T | T |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|