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Job DescriptionP08142
Confidence100.00%DateThu Jan 5 11:00:40 GMT 2012
Rank12Aligned Residues517
% Identity27%Templatec2v3wC_
PDB info PDB header:lyaseChain: C: PDB Molecule:benzoylformate decarboxylase; PDBTitle: crystal structure of the benzoylformate decarboxylase2 variant l461a from pseudomonas putida
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  TGAEFIVHFLEQQGIKIVTGIPGGSILPVYDALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVT
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Template Sequence  SVHGTTYELLRRQGIDTVFGNPGSNELPFLKDFPE. . DFRYILALQEACVVGIADGYAQASRKPAFINLHSAAGTGNAMG
Template Known Secondary structure  BTT




GGGTT

T..T

SSTS
T
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   3......10.........20.........30....... ..40.........50.........60.........70.........80
 
   94.....100.........110.........120. ........130.........140.........150.........160.........170..
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Query Sequence  AIADARLDSIPLICITGQVPASMIGTDA. FQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWIDIPK
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Template Sequence  ALSNAWNSHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLVKWSYEPASAAEVPHAMSRAIHMASMAPQGPVYLSVPY
Template Known Secondary structure  TT



TTT
TT

TTGGGTTTTS
S

SSSTTSSS


G
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   173......180..... ....190.........200.........210.........220... ......230.........240...... ..
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Query Sequence  DVQTAVFEIETQP. AMAEKAAAPAFSEESIRDAAAMINAAKRPVLYLGGGVI. . NAPARVRELAEKAQLPTTMTLMA. LG
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Template Sequence  DDWDKDADPQSHHLFDRHVSSSVRLNDQDLDILVKALNSASNPAIVLGPDVDAANANADCVMLAERLKAPVWVAPSAPRC
Template Known Secondary structure  GGTTSB

GGGGGGTT










SS

TT
TT


SS
SB
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   249250.........260.........270.........280.........290......... 300.........310.........320.......
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Query Sequence  MLPKAHPLSLGMLGMHGVRSTNYILQEADLLIVLGARFDDRAIGKTEQFCP. NAKIIHVDIDRAELGKIKQPHVAIQADV
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Template Sequence  PFPTRHPCFRGLMP. AGIAAISQLLEGHDVVLVIGAPVFRYHQYDPGQYLKPGTRLISVTCDPLEAA. RAPMGDAIVADI
Template Known Secondary structure 
S
TTSTT

.S
TT
SSS
TT


S


S
SS
SS
S
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   241........250.... .....260.........270.........280.........290.........300...... ...310........
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
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Query Sequence  DDVLAQLIPLVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVGQHQMWTAQAYPLNRP
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Template Sequence  GAMASALANLVEESSRQLP. . . . . . TAAPEPAKVDQDAGRLHPETVFDTLNDMAPENAIYLNESTSTTAQMWQRLNMRNP
Template Known Secondary structure  S


SS


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SSSB
S
TT

TTS



SS
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   319320.........330....... ..340.........350.........360.........370.........380.........390..
 
   408.410.........420.........430.........440.........450.........460.........470.........480.......
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Query Sequence  RQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQ
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Template Sequence  GSYYFCA. AGGLGFALPAAIGVQLAEPERQVIAVIGDGSANYSISALWTAAQYNIPTIFVIMNNGTYGAARWFAGVLEAE
Template Known Secondary structure  S

T.T

SSS
TTS
TTGGGTTGGGT



SB
TT

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   393...... 400.........410.........420.........430.........440.........450.........460.........470.
 
   488.490.........500.........510.........520.........530.........540..
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Query Sequence  GVFAATYPGKINFMQIAAGFGLETCDLNNEADPQASLQEIINRPGPALIHVRIDA
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Template Sequence  NV. PGLDVPGIDFRALAKGYGVQALKADNLEQLKGSLQEALSAKGPVLIEVSTVS
Template Known Secondary structure  S
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S
B




TT
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   472. ......480.........490.........500.........510.........520.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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