Job Description P08142 Confidence 55.27% Date Thu Jan 5 11:00:40 GMT 2012 Rank 151 Aligned Residues 70 % Identity 21% Template c2v3cC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:signal recognition 54 kda protein; PDBTitle: crystal structure of the srp54-srp19-7s.s srp rna complex2 of m. jannaschii Resolution 2.50 Å

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		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		S	I	R	D	A	A	A	M	I	N	A	A	K	R	P	V	L	Y	L	G	G	G	V	I	.	N	A	P	A	R	V	R	E	L	A	E	K	A	Q	L	P	T	T	M	T	L	M	A	L	G	M	L	P	K	A	H	P	L	S	L	G	M	L	G	M	H	G	V	R	S	T	N	Y	I	L	Q	E	A	D	L
Query Conservation																										.
Alig confidence																										.																					.	.	.	.	.											.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.											.	.	.	.	.	.	.
Template Sequence		A	A	K	L	A	R	Y	I	Q	K	R	G	L	K	P	A	L	I	A	A	D	T	Y	R	P	A	A	Y	E	Q	L	K	Q	L	A	E	K	I	H	V	P	I	Y	G	D	.	.	.	.	.	E	T	R	T	K	S	P	V	D	I	.	.	.	.	.	.	.	V	K	E	G	M	E	K	F	K	K	A	D	V
Template Known Secondary structure																						S				T	T	G	G	G	S	S							S	S							.	.	.	.	.	S	S	S			S	S	S	T	T	.	.	.	.	.	.	.							T	T	S	S		S
Template Predicted Secondary structure																																															.	.	.	.	.											.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.	.
		279	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		185	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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