Return to main results Retrieve Phyre Job Id

Job DescriptionP08142
Confidence100.00%DateThu Jan 5 11:00:40 GMT 2012
Rank14Aligned Residues531
% Identity25%Templatec2ji6B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxalyl-coa decarboxylase; PDBTitle: x-ray structure of oxalyl-coa decarboxylase in complex with2 3-deaza-thdp and oxalyl-coa
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12. ......20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure  .




















Query SS confidence 

.












































































Query Sequence  RF. TGAEFIVHFLEQQGIKIVTGIPGGSILPVYDALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATN
Query Conservation    .

   
   
   

  


 

     
   
     
  
    
  
   
 



  
   

  
 
 
  
Alig confidence 

.



































.







































Template Conservation      
 
 
   
   

  


 

     
  

   . 
  
    
  
   
 
 
   
   
   
 


  
Template Sequence  ELTDGFHVLIDALKMNDIDTMYGVVGIPITNLARMWQDD. GQRFYSFRHEQHAGYAASIAGYIEGKPGVCLTVSAPGFLN
Template Known Secondary structure 
TT




TTT.T

SSSS

S
Template Predicted Secondary structure 













.








Template SS confidence 















































































   8.10.........20.........30.........40...... ...50.........60.........70.........80......
 
   91........100.........110........ .120.........130.........140.........150.........160........
Predicted Secondary structure 








..















Query SS confidence 



























. .

















































Query Sequence  LVTAIADARLDSIPLICITGQVPASMIG. . TDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWI
Query Conservation      
  
     


 
 
        ..    
  
   
     
              
  
   
     


 
Alig confidence 



























..

















































Template Conservation   
  
  
     




 
              
            
    
         
  
   
     


 
Template Sequence  GVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCKASFRINSIKDIPIGIARAVRTAVSGRPGGVYV
Template Known Secondary structure  T



TTTS

TT


GGGSS

SGGGSSS

Template Predicted Secondary structure 

























Template SS confidence 















































































   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   169170.........180..... ....190.........200.........210.........220... ......230.........240..
Predicted Secondary structure 












....



















..



Query SS confidence 
















. . . .





































. .


















Query Sequence  DIPKDVQTAVFEIETQP. . . . AMAEKAAAPAFSEESIRDAAAMINAAKRPVLYLGGGVI. . NAPARVRELAEKAQLPTTM
Query Conservation   

 
            ....                      
  






 
 
  ..     
  


 

 

  
Alig confidence 
















....





































..


















Template Conservation   

 
                                      
  
 




 
 
         
  


    

  
Template Sequence  DLPAKLFGQTISVEEANKLLFKPIDPAPAQIPAEDAIARAADLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLP
Template Known Secondary structure  T




S
SS






SS

TT
T

Template Predicted Secondary structure 






































Template SS confidence 















































































   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   243......250.........260.........270.........280.........290..... ....300.........310.........320
Predicted Secondary structure 






































..















Query SS confidence 




















































. .
























Query Sequence  TLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEADLLIVLGARFDDRAIGKTE. . QFCPNAKIIHVDIDRAELGKIKQPH
Query Conservation 
   
       
   
  
          
   
 

 

            ..        
 
              
Alig confidence 



















.......

























..
























Template Conservation 
    
          
   .......   
   
 

 

  
                   
 
              
Template Sequence  MGMAKGLLPDNHPQSAAATR. . . . . . . AFALAQCDVCVLIGARLNWLMQHGKGKTWGDELKKYVQIDIQANEMDSNQPIA
Template Known Secondary structure 
GGGTTSS
TT
TTB
GGG.......
SS


SGGGGGG
SGGGTTS

S
GGGTTSSS

S
Template Predicted Secondary structure 












.......

































Template SS confidence 















































































   247..250.........260...... ...270.........280.........290.........300.........310.........
 
   321........330........ .340.........350.........360 .........370.........380. ........390
Predicted Secondary structure 


..








......









..




Query SS confidence 

















. .





















. . . . . .




















. .








Query Sequence  VAIQADVDDVLAQLIPLV. . EAQPRAEWHQLVADLQREFPCP. . . . . . IPKACDPLSHYGLINAVAACV. . DDNAIITTD
Query Conservation    
  
    
  
    ..                      ......       
        
   
..    

  
Alig confidence 

















..





















......




















..








Template Conservation    
  
    
  
   
                                              
        
  

 
Template Sequence  APVVGDIKSAVSLLRKALKGAPKADAEWTGALKAKVDGNKAKLAGKMTAETPSGMMNYSNSLGVVRDFMLANPDISLVNE
Template Known Secondary structure  S
STT








TT
B


SS
Template Predicted Secondary structure 

























Template SS confidence 















































































   320.........330.........340.........350.........360.........370.........380.........390.........
 
   391........400.........410.........420.........430.........440.........450.........460.........470
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  VGQHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMN
Query Conservation   
                          

  
  



 

     

 
 




     

 

      
 




Alig confidence 










































.



































Template Conservation                            
 

  
  



    .   

 
 


 
      
 

    
 
 


 
Template Sequence  GANALDNTRMIVDMLKPRKRLDSGTWGVMGIGMGYCVAAAAVT. GKPVIAVEGDSAFGFSGMELETICRYNLPVTVIIMN
Template Known Secondary structure  SSS


STT
STTTT
TT
.
S
TTGGGTT

Template Predicted Secondary structure 















.









Template SS confidence 















































































   400.........410.........420.........430.........440.. .......450.........460.........470........
 
   471........480.........490.........500.........510.........520.........530.........540.........550
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  NEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFGLETCDLNNEADPQASLQEIINRPGPALIHVRIDAEEKVYPMV
Query Conservation 
                           
   

 
 
     
    

  

  
    

 



 

      
  
Alig confidence 











...































































.
Template Conservation 
           ...             
   

 
 
     
    

  

  
    

 



 

        .
Template Sequence  NGGIYKGNEADP. . . QPGVISCTRLTRGRYDMMMEAFGGKGYVANTPAELKAALEEAVASGKPCLINAMIDPDAGVESG.
Template Known Secondary structure 
SBSS
S



S...STT


TTB




TTT
SSTS
B
TTS

TTG.
Template Predicted Secondary structure 







...
































.
Template SS confidence 















































































   479480.........490 .........500.........510.........520.........530.........540.........550....
 
   551........
Predicted Secondary structure 





Query SS confidence 








Query Sequence  PPGAANTEM
Query Conservation           
Alig confidence  ....




Template Conservation  ....
    
Template Sequence  . . . . RIKSL
Template Known Secondary structure  ....GGGGG
Template Predicted Secondary structure  ....




Template SS confidence 








   555....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions