Job Description P08142 Confidence 34.07% Date Thu Jan 5 11:00:40 GMT 2012 Rank 172 Aligned Residues 168 % Identity 15% Template c2csuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3 Resolution 2.20 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	D	A	L	S	Q	S	T	Q	I	R	H	I	L	A	R	H	E	Q	G	A	G	F	I	A	Q	G	M	A	R	T	D	G	K	P	A	V	C	M	A	C	S	G	P	G	A	T	N	L	V	T	A	I	A	D	A	R	L	D	S	I	P	L	I	C	I	T	G	Q	V	P	A	S	M	I	G	T	D	A
Query Conservation
Alig confidence																																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	E	A	A	F	K	Q	S	G	V	L	V	A	N	T	I	D	E	X	L	S	X	A	R	A	F	S	Q	P	L	P	R	G	.	N	K	V	A	I	X	T	N	A	G	G	P	G	V	L	T	A	D	E	L	D	K	R	G	L	K	L	A	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T					S	S										G	G	G	S				S	S	.								S													T	T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		F	Q	E	V	D	T	Y	G	I	S	I	P	I	T	K	H	N	Y	L	V	R	H	I	E	E	L	.	.	.	.	.	P	Q	V	M	S	D	A	F	R	I	A	Q	S	G	R	P	G	P	V	W	I	D	I	P	K	D	V	Q	T	A	V	F	E	I	E	T	Q	P	A	M	A	E	K	A	A	A	P	A	F
Query Conservation																												.	.	.	.	.
Alig confidence		.	.																									.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	E	K	T	I	E	E	L	R	S	F	L	P	P	X	A	A	V	K	N	P	V	D	X	I	A	S	A	R	G	E	D	Y	Y	R	T	A	K	L	L	L	Q	D	P	N	V	D	X	L	I	A	I	C	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	F	A	G	X	T
Template Known Secondary structure		.	.												S		T	T				S	S						T	T																	T	T		S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	T	T
Template Predicted Secondary structure		.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.																	.	380	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		S	E	E	S	I	R	D	A	A	A	M	I	N	A	A	.	.	K	R	P	V	L	Y	L	G	G	G	V	I	N	A	P	A	R	V	R	E	L	A	E	K	A	Q	L	P	T	T	M	T	L
Query Conservation																	.	.
Alig confidence																	.	.																									.
Template Conservation																																											.
Template Sequence		L	T	E	H	A	E	G	I	I	R	A	V	K	E	V	N	N	E	K	P	V	L	A	X	F	X	A	G	Y	V	S	E	K	A	K	E	L	L	E	K	N	.	G	I	P	T	Y	E	R	P
Template Known Secondary structure		S	S																																							T	.	T					S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions