Return to main results Retrieve Phyre Job Id

Job DescriptionP08142
Confidence100.00%DateThu Jan 5 11:00:40 GMT 2012
Rank2Aligned Residues537
% Identity27%Templatec1powA_
PDB info PDB header:oxidoreductase(oxygen as acceptor)Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: the refined structures of a stabilized mutant and of wild-type2 pyruvate oxidase from lactobacillus plantarum
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40........ .50.........60.........70.........80.........
Predicted Secondary structure 










.










Query SS confidence 





































.








































Query Sequence  KRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYDALSQ. STQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGAT
Query Conservation     

   
   
   

  


 

     
   
  .   
  
    
  
   
 



  
   

  
 
 
  
Alig confidence 





































.








































Template Conservation    
 

  
   
   

  


 

     
  

      
  
    
  

  
 



 

   
   




  
Template Sequence  TNILAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGT
Template Known Secondary structure 
TT




GGGTTTTS
SSSS

TT
Template Predicted Secondary structure 

























Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   90.........100.........110.........120.........130.........140.........150.........160.........
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  NLVTAIADARLDSIPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWID
Query Conservation 
    
  
     


 
 
            
  
   
     
              
  
   
     


 
 
Alig confidence 








































































.





Template Conservation 
    
  
     


 
 
            
  

        
    
         
  
   
    .


 
 
Template Sequence  HLMNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEMNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQ. GVAVVQ
Template Known Secondary structure  TTTT



TTTTTS

TT



TTT


SSST.S
Template Predicted Secondary structure 























.

Template SS confidence 















































































   8990.........100.........110.........120.........130.........140.........150.........160. ......
 
   170.........180.........190... ......200.........210.........220.........230.........240......
Predicted Secondary structure 




















...


















Query SS confidence 























. . .




















































Query Sequence  IPKDVQTAVFEIETQPAMAEKAAA. . . PAFSEESIRDAAAMINAAKRPVLYLGGGVINAPARVRELAEKAQLPTTMTLMA
Query Conservation 

 
                    ...              
  






 
 
       
  


 

 

  
   
Alig confidence 























...




















































Template Conservation 

 
                              
      
  
 




 
 
   
   
  


 

 

  
   
Template Sequence  IPVDLPWQQIPAEDWYASANSYQTPLLPEPDVQAVTRLTQTLLAAERPLIYYGIGARKAGKELEQLSKTLKIPLMSTYPA
Template Known Secondary structure  TTGGGSGGG



GGG









T
SS
GGGGGGT


GGG
Template Predicted Secondary structure 










































Template SS confidence 















































































   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   247..250.........260.........270.........280.........290.........300.........310.........320......
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  LGMLPKAHPLSLGMLGMHGVRSTNYILQEADLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQAD
Query Conservation 
       
   
  
          
   
 

 

                    
 
                
  
Alig confidence 















































..





























Template Conservation 

     

   
  
          
  

 

 

           ..       
 

 
             
  
Template Sequence  KGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEVSKA. . FKNTRYFLQIDIDPAKLGKRHKTDIAVLAD
Template Known Secondary structure  TTSS
TT
TTB



SSS


SS


TTTT..TTT
S
S
GGGTTSSS

S
S
Template Predicted Secondary structure 



























..















Template SS confidence 















































































   248.250.........260.........270.........280.........290..... ....300.........310.........320.....
 
   327..330.........340... ......350.........360.........370.........380.........390.........400..
Predicted Secondary structure 





....























Query SS confidence 
















. . . .


























































Query Sequence  VDDVLAQLIPLVEAQPR. . . . AEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVGQHQMWTAQAY
Query Conservation      
  
         ....                        
        
   
    

  
 
          
Alig confidence 
















....


























































Template Conservation      
  
   
                                 
        
        


 
 
          
Template Sequence  AQKTLAAILAQVSERESTPWWQANLANVKNWRAYLASLEDKQEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHL
Template Known Secondary structure  T






T

SSB



TT

SS
Template Predicted Secondary structure 

























Template SS confidence 















































































   326...330.........340.........350.........360.........370.........380.........390.........400.....
 
   403......410.........420.........430.........440.........450.........460.........470.........480..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  PLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQQS
Query Conservation                  

  
  



 

     

 
 




     

 

      
 





           
Alig confidence 















































































Template Conservation                  

  
  






 
   

   




     

 

    


 


 

 
 
       
Template Sequence  KLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQYGFIKDEQE
Template Known Secondary structure 


TT



SS

TTT
TTS
GGGTT


SB
Template Predicted Secondary structure 



























Template SS confidence 















































































   406...410.........420.........430.........440.........450.........460.........470.........480.....
 
   483......490.........500.........510.........520..... ....530.........540.........550.
Predicted Secondary structure 






















..















Query SS confidence 










































. .

























Query Sequence  LFYEQGVFAATYPGKINFMQIAAGFGLETCDLNNEADPQASLQ. . EIINRPGPALIHVRIDAEEKVYPMVP
Query Conservation                  
   

 
 
     
    

  

 .. 
    

 



 

      
   
Alig confidence 








.
































..

























Template Conservation           .      

  

 
 
     
    

  

  
 
     
 



 

          
Template Sequence  DTNQNDFIG. VEFNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQHEPVLIDAVITGDRPLPAEKL
Template Known Secondary structure 
SS


S.SB




TT

BGGGTTTS








TTS
Template Predicted Secondary structure 







.




























Template SS confidence 






































































   486...490.... .....500.........510.........520.........530.........540.........550.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions