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Job DescriptionP08142
Confidence100.00%DateThu Jan 5 11:00:40 GMT 2012
Rank9Aligned Residues528
% Identity29%Templatec1ozhD_
PDB info PDB header:lyaseChain: D: PDB Molecule:acetolactate synthase, catabolic; PDBTitle: the crystal structure of klebsiella pneumoniae acetolactate2 synthase with enzyme-bound cofactor and with an unusual3 intermediate.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYDALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGAT
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Template Sequence  RQWAHGADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLDS. SIRIIPVRHEANAAFMAAAVGRITGKAGVALVTSGPGCS
Template Known Secondary structure  S
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GGGTS.SS
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   8.10.........20.........30.........40....... ..50.........60.........70.........80......
 
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Query Sequence  NLVTAIADARLDSIPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQSGRPGPVWID
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Template Sequence  NLITGMATANSEGDPVVALGGAVK. . . . . . RADKSMDTVAMFSPVTKYAIEVTAPDALAEVVSNAFRAAEQGRPGSAFVS
Template Known Secondary structure  TTT



......GGG



GGG
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Query Sequence  IPKDVQTAVFEIETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYLGGGVINAP. . ARVRELAEKAQLPTTMTLMAL
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Template Sequence  LPQDVVDGPVSGKVLPASGAPQMGA. APDDAIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQAA
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GGGGSGGG



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   167..170.........180.........190. ........200.........210.........220.........230.........240.....
 
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Query Sequence  GMLPKAH. PLSLGMLGMHGVRSTNYILQEADLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQAD
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Template Sequence  GAVNQDNFSRFAGRVGLFNNQAGDRLLQLADLVICIGYSPVEYEPAMWNS. . GNATLVHIDVLPAYEERNYTPDVELVGD
Template Known Secondary structure  TTS
GGG
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SSBTT

SS

GGGS
GGGT

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   246...250.........260.........270.........280.........290..... ....300.........310.........320...
 
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Query Sequence  VDDVLAQLIPLVEAQ. PRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVGQHQMWTAQAYPLN
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Template Sequence  IAGTLNKLAQNIDHRLVLSPQAAEILRDRQHQRELLDLNQFALHPLRIVRAMQDIVNSDVTLTVDMGSFHIWIARYLYTF
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SSB


TT

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   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   406...410.........420.........430.........440.........450.........460.........470.........480.....
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Query Sequence  RPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMNIQEMATASENQLDVKIILMNNEALGLVHQQQSLFY
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Template Sequence  RARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSVSGDGGFLQSSMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKY
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TT

TT
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TTT


SB
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Query Sequence  EQGVFAATYPGKINFMQIAAGFGLETCDLNNEADPQASLQEIINRPGPALIHVRIDAEEKVYPM
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Template Sequence  QR. . LSGVEFGPMDFKAYAESFGAKGFAVESAEALEPTLRAAMDVDGPAVVAIPVDYRDNPLLM
Template Known Secondary structure  SS..

S
B




TTTS

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   489490 .........500.........510.........520.........530.........540.........550
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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