Job Description P08142 Confidence 98.01% Date Thu Jan 5 11:00:40 GMT 2012 Rank 88 Aligned Residues 249 % Identity 12% Template c1olsB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit; PDBTitle: roles of his291-alpha and his146-beta' in the reductive2 acylation reaction catalyzed by human branched-chain3 alpha-ketoacid dehydrogenase Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.					.	.																	.	.
Query SS confidence																												.	.	.	.					.	.																	.	.
Query Sequence		S	G	T	T	S	T	R	K	R	F	T	G	A	E	F	I	V	H	F	L	E	Q	Q	G	I	K	.	.	.	.	I	V	T	G	.	.	I	P	G	G	S	I	L	P	V	Y	D	A	L	S	Q	S	.	.	T	Q	I	R	H	I	L	A	R	H	E	Q	G	A	G	F	I	A	Q	G	M	A	R	T	D	G
Query Conservation																												.	.	.	.					.	.																	.	.
Alig confidence																												.	.	.	.					.	.																	.	.
Template Conservation
Template Sequence		Q	P	E	Y	G	Q	T	Q	K	M	N	L	F	Q	S	V	T	S	A	L	D	N	S	L	A	K	D	P	T	A	V	I	F	G	E	D	V	A	F	G	G	V	F	R	C	T	V	G	L	R	D	K	Y	G	K	D	R	V	F	N	T	P	L	C	E	Q	G	I	V	G	F	G	I	G	I	A	V	T	G	A
Template Known Secondary structure						S																							T	T						T	T	T	T	T	T		T	T	S	T	T	T	T							T	T	T						S															T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																																			.
Query SS confidence																											.	.	.	.	.	.	.	.	.																																			.
Query Sequence		K	P	A	V	C	M	A	C	S	G	P	G	A	T	N	L	V	T	A	I	A	D	A	R	L	.	.	.	.	.	.	.	.	.	D	S	I	P	L	I	C	I	T	G	Q	V	P	A	S	M	I	G	T	D	A	F	Q	E	V	D	T	Y	G	I	S	I	P	I	.	T	K	H	N	Y	L	V	R	H	I	E
Query Conservation																											.	.	.	.	.	.	.	.	.																																			.
Alig confidence				.																							.	.	.	.	.	.	.	.	.														.																					.
Template Conservation				.																																													.
Template Sequence		T	A	.	I	A	E	I	Q	F	A	D	Y	I	F	P	A	F	D	Q	I	V	N	E	A	A	K	Y	R	Y	R	S	G	D	L	F	N	C	G	S	L	T	I	R	S	P	W	G	.	C	V	G	H	G	A	L	Y	H	S	Q	S	P	E	A	F	F	A	H	C	P	G	I	K	V	V	I	P	R	S	P	F
Template Known Secondary structure				.					S	S	G	G	G		G	G	G						T	T	G	G	G						T	T	S	S			T	T								S	.			S	S		G	G	G	S	S									T		T	T							S	S
Template Predicted Secondary structure				.																																													.
Template SS confidence
		92	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	Q	V	M	S	D	A	F	R	I	A	Q	S	G	R	P	G	P	V	W	I	D	I	P	K	D	V	Q	T	A	V	F	E	I	E	T	Q	P	A	M	A	E	K	A	A	A	P	A	F	S	E	E	S	I	R	D	A	A	A	M	I	N	A	A	K	R	P	V	L	Y	L	G	G	G	V	I	N	A
Query Conservation
Alig confidence														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	K	G	L	L	L	S	C	I	E	D	.	.	.	.	.	K	N	P	C	I	F	F	E	P	K	I	L	Y	R	A	A	A	E	E	V	P	I	E	P	Y	N	I	P	L	S	Q	A	E	V	I	Q	E	.	.	.	.	.	.	.	.	.	.	G	S	D	V	T	L	V	A	W	G	T	Q	V	H	V	I
Template Known Secondary structure													S	.	.	.	.	.	S	S								G	G	G	S	S	S							S	S						T	T								.	.	.	.	.	.	.	.	.	.		S	S							T	T
Template Predicted Secondary structure														.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.											.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	R	V	R	E	L	A	E	K	A	Q	L	P	T	T	M	T	L	M	A	L	G	M	L	P	K	A	H	P	L	S	L	G	M	L	G	M	H	G	V	R	S	T	N	Y	I	L	Q	E	A	D	L	L	I	V	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	V	A	S	M	A	K	E	K	L	G	V	S	C	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	L	R	T	I	I	P	W	D	V	D	T	I	C	K	S	V	I	K	T	G	R	L	L	I	S
Template Known Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.														.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions