Job Description P08142 Confidence 71.67% Date Thu Jan 5 11:00:40 GMT 2012 Rank 140 Aligned Residues 169 % Identity 11% Template c1ogyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the heterodimeric nitrate reductase2 from rhodobacter sphaeroides Resolution 3.2 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.		.	.	.	.	240	.	.
Predicted Secondary structure																																										.	.	.	.	.	.																			.								.
Query SS confidence																																										.	.	.	.	.	.																			.								.
Query Sequence		P	K	D	V	Q	T	A	V	F	E	I	E	T	Q	P	A	M	A	E	K	A	A	A	P	A	F	S	E	E	S	I	R	D	A	A	A	M	I	N	A	.	.	.	.	.	.	A	K	R	P	V	L	Y	L	G	G	G	V	I	N	A	P	A	R	.	V	R	E	L	A	E	K	.	A	Q	L	P	T	T	M
Query Conservation																																										.	.	.	.	.	.																			.								.
Alig confidence																																										.	.	.	.	.	.																			.								.
Template Conservation
Template Sequence		E	D	R	L	T	T	P	L	L	R	M	K	D	G	V	Y	H	K	E	G	E	F	A	P	V	S	W	D	E	A	F	D	V	M	A	A	Q	A	K	L	V	L	K	E	K	A	P	E	A	V	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	M	R	A	G	F	R	S	N	N	L	D
Template Known Secondary structure		T	T				S				S		S	S	S				T	T																										T		G	G	G							T	T	S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.							.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		T	L	M	A	L	G	M	L	P	K	A	H	P	L	S	L	G	M	L	G	M	H	G	V	R	S	T	N	Y	I	L	Q	E	A	D	L	L	I	V	L	G	A	R	F	D	D	R	A	I	G	K	T	E	Q	F	.	.	.	.	.	.	C	P	N	A	K	I	I	H	V	D	I	D	R	A	E	L	G	K	I
Query Conservation																																																									.	.	.	.	.	.
Alig confidence																		.																																							.	.	.	.	.	.
Template Conservation																		.
Template Sequence		P	N	A	R	H	C	M	A	S	A	A	T	A	F	M	R	.	T	F	G	M	D	E	P	M	G	C	Y	D	D	F	E	A	A	D	A	F	V	L	W	G	S	N	M	A	E	M	H	P	I	L	W	S	R	L	T	D	R	R	L	S	H	E	H	V	R	V	A	V	L	S	T	F	T	H	R	S	S	D	L
Template Known Secondary structure			T					T										.			S	S		S		S	S		T	T						S						S							S														S	T	T								S	S	B		G	G	G	G	S
Template Predicted Secondary structure																		.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		317	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		K	Q	P	H	V	A	I	Q	.	.	A	D	V	D	D	V	L	A	Q	L	I	P	L	V	E	A
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		S	D	T	P	I	I	F	R	P	G	T	D	R	A	I	L	N	Y	I	A	H	H	I	I	S	T
Template Known Secondary structure			S							T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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