Job Description P08142 Confidence 31.65% Date Thu Jan 5 11:00:40 GMT 2012 Rank 177 Aligned Residues 141 % Identity 15% Template c1kqgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase, nitrate-inducible, major subunit; PDBTitle: formate dehydrogenase n from e. coli Resolution 2.80 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210																			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		E	E	S	I	R	D	A	A	A	M	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	R	P	V	L	Y	L	G	G	G	V	I	N	A	P	A	.	R	V	R	E	L	A	E	K	A	Q	L	P	T	T	M	T	L	M	A	L	G	M	L	P	K	A	H	P	L	S	L
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																				.	.
Template Conservation																																																																						.	.
Template Sequence		E	E	A	F	S	R	I	A	K	L	M	K	A	D	R	D	A	N	F	I	E	K	N	E	Q	G	V	T	V	N	R	W	L	S	T	G	M	L	C	A	S	G	A	S	N	E	T	G	M	L	T	Q	K	F	A	R	S	L	G	M	L	A	V	D	N	Q	A	R	.	.	V	H	G	P	T	V	A	S	L	A
Template Known Secondary structure																									T	T	S						B		S							T	T	S															T	T	B						G	G	G	.	.
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.						.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.
Predicted Secondary structure																																									.	.	.	.	.																												.	.
Query SS confidence																																									.	.	.	.	.																												.	.
Query Sequence		G	M	L	G	M	H	G	V	R	S	T	N	Y	I	L	Q	E	A	D	L	L	I	V	L	G	A	R	F	D	D	R	A	I	G	K	T	E	Q	F	.	.	.	.	.	C	P	N	A	K	I	I	H	V	D	I	D	R	A	E	L	G	K	I	K	Q	P	H	V	A	I	Q	.	.	A	D	V	D	D	V	L
Query Conservation																																									.	.	.	.	.																												.	.
Alig confidence																																									.	.	.	.	.																												.	.
Template Conservation
Template Sequence		P	T	F	G	R	G	A	M	T	N	H	W	V	D	I	K	N	A	N	V	V	M	V	M	G	G	N	A	A	E	A	H	P	V	G	F	R	W	A	M	E	A	K	N	N	N	D	A	T	L	I	V	V	D	P	R	F	T	R	T	A	S	V	A	D	I	Y	A	P	I	R	S	G	T	D	I	T	F	L	S
Template Known Secondary structure					S			S		S	S		T	G	G	G	G	G		S						S							S														S									S	S							T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		332	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	I	P	L	V	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	L	R	Y	L	I	E	N
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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