Job Description P08142 Confidence 34.04% Date Thu Jan 5 11:00:40 GMT 2012 Rank 173 Aligned Residues 141 % Identity 11% Template c1h0hA_ PDB info PDB header:dehydrogenase Chain: A: PDB Molecule:formate dehydrogenase (large subunit); PDBTitle: tungsten containing formate dehydrogenase from2 desulfovibrio gigas Resolution 1.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		198	.	200	.	.	.	.	.	.	.	.	.	210																		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		E	E	S	I	R	D	A	A	A	M	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	R	P	V	L	Y	L	G	G	G	V	I	N	A	P	A	R	.	.	V	R	E	L	A	E	K	A	Q	L	P	T	T	M	T	L	M	A	L	G	M	L	P	K	A	H	P	L	S	L
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																			.	.
Template Conservation																																																																						.	.
Template Sequence		D	W	M	L	D	T	I	A	E	R	V	A	K	T	R	E	A	T	F	V	T	K	N	A	K	G	Q	V	V	N	R	C	D	G	I	A	S	V	G	S	A	A	M	D	N	E	E	C	W	I	Y	Q	A	W	L	R	S	L	G	L	F	Y	I	E	H	Q	A	R	.	.	I	H	S	A	T	V	A	A	L	A
Template Known Secondary structure																									T	T	S								S							T	T	S															T	T	B						G	G	G	.	.
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.
Predicted Secondary structure																																									.	.	.	.																												.	.
Query SS confidence																																									.	.	.	.																												.	.
Query Sequence		G	M	L	G	M	H	G	V	R	S	T	N	Y	I	L	Q	E	A	D	L	L	I	V	L	G	A	R	F	D	D	R	A	I	G	K	T	E	Q	F	.	.	.	.	C	P	N	A	K	I	I	H	V	D	I	D	R	A	E	L	G	K	I	K	Q	P	H	V	A	I	Q	.	.	A	D	V	D	D	V	L	A
Query Conservation																																									.	.	.	.																												.	.
Alig confidence																																									.	.	.	.																												.	.
Template Conservation
Template Sequence		E	S	Y	G	R	G	A	M	T	N	H	W	I	D	L	K	N	S	D	V	I	L	M	M	G	S	N	P	A	E	N	H	P	I	S	F	K	W	V	M	R	A	K	D	K	G	A	T	L	I	H	V	D	P	R	Y	T	R	T	S	T	K	C	D	L	Y	A	P	L	R	S	G	S	D	I	A	F	L	N	G
Template Known Secondary structure					S			S		S	S		T	G	G	G	G	G		S						S							S	T	T											T	T								S	S			T	T	G	G	G		S							T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	I	P	L	V	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	T	K	Y	I	L	E	K
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions