|   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | F | I | D | A | H | L | H | I | E | S | S | M | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | P | V | T | F | E | T | A | T | L | P | R | G | L | T | T | V | I | C | D | P | H | E | I | V | N | V | M | G | E | A | G | F | A | W | F | A | R | C | A | E | Q | A | R | Q | N | Q | Y | L | Q | V | S |
Query Conservation |   |
|
|
|
|   |
|   |
|
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|   |
|   |   |
|   |
|   |
|   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
T | A | I | D | S | H | A | H | V | F | S | R | G | L | N | L | A | S | Q | R | R | Y | A | P | N | Y | D | A | P | L | G | D | Y | L | G | Q | L | R | A | H | G | F | S | H | G | V | L | V | Q | P | S | F | L | G | T | D | N | . |
. |
. |
. |
R | Y | L | L | S | A | L | Q | T | V | P | G | Q | L | R | G | V | V | X |
Template Known Secondary structure |   |
|
|  |  | B |
|
|
|
| B |
|  |  |  |  |  |  | T | T |
|
| S | S |
|
| S |
| B |
|  |  |  |  |  |  |  |  |  |  | T | S |
|
|  |  |
|
| B |
|
| G | G | G | T | T |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  | S | T | T | T | B |
|
| B | B |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
|
|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | C | V | P | A | L | E | G | C | D | V | N | G | A | S | F | T | L | E | Q | M | L | A | W | R | D | H | P | Q | V | T | G | L | A | E | M | M | D | Y | P | G | . |
. |
. |
V | I | S | G | Q | N | A | L | L | D | K | L | D | A | F | R | H | L | T | L | D | G | H | C | P | G | L | G | G | K | E | L | N | A | Y | I |
Query Conservation |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   | . | . | . |
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | E | R | D | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | A | T | L | A | E | X | A | R | L | G | V | R | G | V | R | L | N | L | X | G | Q | D | X | P | D | L | T | G | A | Q | W | R | P | L | L | E | R | I | G | E | Q | G | W | H | V | E | L | H | R | Q | V | A | D | I | P | V | L | V | R | A | L |
Template Known Secondary structure |   |
|
| S | S |
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |
|
|
| S | S | S |
|
|
|
| T | T | S | T | T | T |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
| S |
| T | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
  |   |
228 | . | 230 | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
Predicted Secondary structure |   |
 |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | E | N | C | H | E | S | Y | Q | L | E | E | G | R | R | K | L | Q | L | G | M | S | L | M | I | R | E | G | S | A | A | R | N | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | A | L | A | P | L | I | N | E | F | N | S | P | Q | C | M | L | C | T | D |
Query Conservation |   |
  |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
Q | P | Y | G | L | D | I | V | I | D | H | F | G | R | P | D | A | R | R | G | L | G | Q | P | G | F | A | E | L | L | T | L | S | G | R | G | K | V | W | V | K | V | S | G | I | Y | R | L | Q | G | S | P | E | E | N | L | A | F | A | R | Q | A | L | C | A | L | E | A | H | Y | G | A | E | R | L | X | W | G | S | D |
Template Known Secondary structure |   |
T | T | T | T |
|
|  |  |  | S | G | G | G | S |
|
| T | T | S |
| T | T |
| T | T |  |  |  |  | T | T |
|
|
|
| S |
|  |  |  |  |  |  |
| G | G | G | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
  |   |
285 | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | N | P | W | E | I | A | H | E | G | H | I | D | A | L | I | R | R | L | I | E | Q | H | N | V | P | L | H | V | A | Y | R | V | A | S | W | S | T | A | R | H | F | G | L | N |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|
|   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|
|   |
|   |   |   |   |
|   |   |   |
|
|   |
|
|
|
|   |
|
Template Sequence |   |
W | P | H | T | Q | . |
H | E | S | E | V | S | F | G | S | A | V | E | Q | F | E | A | L | G | . |
C | S | A | Q | L | R | Q | A | L | L | L | D | T | A | R | A | L | F | G | F | E |
Template Known Secondary structure |   |
T | T |
| T | T | . |
| T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | |
. | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
  |