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Job DescriptionP31441
Confidence98.99%DateThu Jan 5 11:47:32 GMT 2012
Rank121Aligned Residues235
% Identity15%Templated1e9yb2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   87..90.........100.........110.........120.... .....130.........140.........150.........
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Query Sequence  IDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVN. . . . . . . VMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGC
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Template Sequence  IDTHIHFISPQQ. . . . . IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAK. . . . . . . . .
Template Known Secondary structure  TT
TT.....TT



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TTSSSB

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   133......140.... .....150.........160.........170.........180.........190........
 
   160.........170.........180.........190.........200.........210..... ....220.........230....
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Query Sequence  DVNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHC. . . . . PGLGGKELNAYITAGIENC
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Template Sequence  . . . GNASNDASLADQI. EAGAIGF. . IHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTF
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S
.TT
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GGG


TT
B



TT
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TT

T
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   199200.........210. ....... .220.........230.........240.........250.........260.........270..
 
   235 ....240.........250....... ..260.........270....
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Query Sequence  H. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ESYQLEEGRRKLQLGMSLMIRE. . . . . . . . GSAARNLNALAPLINEF
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Template Sequence  HTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTIAAEDTLHDM
Template Known Secondary structure  TTTSTTS
STTTGGGGGGSTT
GGG
S
BTTTTT

SS


T
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   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   275....280.........290.........300.........310. ........320.........330. ........340.
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Query Sequence  NSPQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVP. . . . . . . . . . . . LHVAYRVASWSTARHFGLNH. LGLLAPGKQA
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Template Sequence  GAFSI. TSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVH
Template Known Secondary structure  TS

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TTSS

TTS
S
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GGGTTT
TTTSSSS
TT


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   354.... .360.........370.........380.........390.........400.........410.........420.........430..
 
   342
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Query Sequence  D
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Template Sequence  H
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   482
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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