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Job DescriptionP31441
Confidence99.52%DateThu Jan 5 11:47:32 GMT 2012
Rank101Aligned Residues248
% Identity13%Templatec3pnzD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:phosphotriesterase family protein; PDBTitle: crystal structure of the lactonase lmo2620 from listeria monocytogenes
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90... ......100.........110.........120.........130........
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Query Sequence  IDARGATAVPGFIDAHLHI. . . . . . . . . . . . . . . . ESSMMTPVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCA
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Template Sequence  IAPEQL. . . . GFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRR. . . . VLDVAQIS
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GGGT....
S

SB

TT
GGG
B

TT




GGG
B
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   11..... ...20.........30.........40.........50.........60.........70.... .....80..
 
   139140.........150.........160..... ....170.........180....... ..190...
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Query Sequence  EQARQNQYLQVSSCVPALEGCDVNGAS. . . . . . . . . . . . . . . . FTLEQMLAWRDHPQVTGLAEMM. . . . . . . . . DYPGVI
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Template Sequence  KETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVFGTGYNMIT
Template Known Secondary structure 


S


GGGGGSB

GGG
S
SBTS
T
GGGSS



B
BTTB

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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   194.....200... ......210.........220 .........230. ..... ...240.........250.........260.
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Query Sequence  SGQNALLDKL. . . DAFRHLTLDGHCPGLGG. . KELNAYITAGI. . . . . ENCHE. . SYQLEEGRRKLQLGMSLMIREGSAA
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Template Sequence  PLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAKI
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B
GGG

TT

GGGTTGGGS

TTT


TT
T
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   262.. .....270.........280.........290...... ...300.........310.........320....
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Query Sequence  RNL. . . . . . NALAPLINEFNSPQCMLCTDDRNPWEIAHEGH. . . . . . . . . . . IDALIRRLIEQHNVPLHVAYRVASWSTA
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Template Sequence  KYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPA
Template Known Secondary structure  TT

TT
GGG




SGGGS

STTTTTS
T
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   244.....250.........260.........270.........280.........290.........300.........310.........320...
 
   325....330
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Query Sequence  RHFGLN
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Template Sequence  RCFTFK
Template Known Secondary structure  S

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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