Job Description P31441 Confidence 99.90% Date Thu Jan 5 11:47:32 GMT 2012 Rank 59 Aligned Residues 273 % Identity 14% Template c3msrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolases; PDBTitle: the crystal structure of an amidohydrolase from mycoplasma synoviae Resolution 2.16 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.																.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	L	Q	R	I	D	A	R	G	A	T	A	V	P	.	.	.	G	F	I	D	A	H	L	H	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	M	M	T	P	V	T	F	E	T	A	T	L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	E	A	G	F
Query Conservation																	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.				.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation													.																																																												.
Template Sequence		E	N	K	F	A	R	T	V	L	G	D	.	I	P	V	E	K	L	G	I	T	D	C	H	D	H	F	I	K	N	G	G	P	E	V	E	E	H	I	D	F	L	X	L	N	V	D	A	S	I	K	E	F	K	E	F	I	D	R	G	G	S	T	I	V	T	X	D	P	P	N	.	V	G	R	D	V	L	K	T
Template Known Secondary structure									T	T			.			G	G	G										S		B		S	S							G	G	G		B																T	T										T	T	.	T	T
Template Predicted Secondary structure													.																																																												.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	.	L	Q	V	S	S	C	V	P	A	L	E	G	C	D	V	N	G	A	S	F	T	L	E	Q	M	L	A	W	R	D	H	P	Q	V	T	G	L	A	E	M	M	D	Y	P	G	V	I	S	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	I	A	N	A	V	K	N	L	G	G	N	V	I	X	S	T	G	F	H	K	A	K	F	Y	D	K	Y	S	S	W	L	A	V	V	P	T	E	E	I	V	K	X	C	V	A	E	I	E	E	G	X	D	E	Y	N	Y	N	G	P	V	V	K	R	S	K	A	K	A	G	I	I	K	A	G	T	G	Y	G
Template Known Secondary structure									G	G	G	T												G	G	G	S		T	T	T	S					S															T			B	T	T	T	T	S	S	S				B		S											B	T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
											197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																								.	.														.	.	.	.	.					.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																								.	.														.	.	.	.	.					.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	N	A	L	L	D	K	L	D	A	F	R	H	L	T	L	D	G	H	C	P	G	L	G	.	.	G	K	E	L	N	A	Y	I	T	A	G	I	E	.	.	.	.	.	N	C	H	E	.	.	.	S	Y	Q	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E
Query Conservation		.	.	.	.	.	.	.	.	.																								.	.														.	.	.	.	.					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																								.	.														.	.	.	.	.					.	.	.
Template Conservation
Template Sequence		A	I	D	R	L	E	L	K	A	L	E	V	A	A	R	T	S	I	L	T	G	C	P	I	L	V	H	T	Q	L	G	T	X	A	L	E	V	A	K	H	L	I	G	F	G	A	N	P	D	K	I	Q	I	S	H	L	N	K	N	P	D	K	Y	Y	Y	E	K	V	I	K	E	T	G	V	T	L	C	F	D	G
Template Known Secondary structure		B																												G	G	G		S												T			G	G	G						G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		258	.	260	.	.	.							.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.													.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	A	A	R	N	.	.	.	.	.	.	L	N	A	L	A	P	L	I	N	E	F	N	S	P	Q	C	M	L	C	T	D	D	R	N	P	W	E	I	A	H	E	G	.	.	.	.	.	.	.	.	.	.	.	.	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R	V	A
Query Conservation								.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																							.
Template Sequence		P	D	R	V	K	Y	Y	P	D	S	L	L	A	E	N	I	K	Y	L	V	D	K	G	L	Q	K	H	I	T	L	S	L	D	A	G	R	I	L	Y	Q	R	N	Y	G	L	T	K	G	K	Q	T	F	G	L	A	Y	L	F	D	R	F	L	P	L	L	K	Q	V	G	.	V	S	K	E	A	I	F	D	I	L
Template Known Secondary structure		T	T		T	T	T																T	T		G	G	G									S	G	G	G	S							T	T						T						T									T	.
Template Predicted Secondary structure																																																																							.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	S	T	A	R	H	F	G	L	N	H	L	G	L	L	A	P	G	K	Q	A	D	I	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	N	P	K	R	V	L	A	F	D	E	K	R	N	F	D	P	L	K	V	S	K	E	V	L
Template Known Secondary structure		T							T	S									G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions