Job Description P31441 Confidence 100.00% Date Thu Jan 5 11:47:32 GMT 2012 Rank 45 Aligned Residues 334 % Identity 19% Template c3mpgB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dihydroorotase; PDBTitle: dihydroorotase from bacillus anthracis Resolution 2.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		D	Y	I	I	D	N	V	S	I	L	D	L	I	N	G	G	E	I	S	G	P	I	V	I	K	G	R	Y	I	A	G	V	G	A	E	Y	T	D	A	P	A	L	Q	R	I	D	A	R	G	A	T	A	V	P	G	F	I	D	A	H	L	H	I	E	S	S	M	M	T	.	.	.	.	P	V	T	F	E	T	A
Query Conservation																																																																							.	.	.	.
Alig confidence														.																									.																																.	.	.	.
Template Conservation														.																									.
Template Sequence		N	Y	L	F	K	N	G	R	Y	M	N	E	.	E	G	K	I	V	A	T	D	L	L	V	Q	D	G	K	I	A	K	V	A	E	N	I	T	.	A	D	N	A	E	V	I	D	V	N	G	K	L	I	A	P	G	L	V	D	V	H	V	H	L	R	E	P	G	G	E	H	K	E	T	I	E	T	G	T	L	A
Template Known Secondary structure													T	.	T	S											S	S	B						T	T			.		T	T	S						T	T																T	T	T		T	T	T
Template Predicted Secondary structure														.																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																		.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	E	A	G	F	A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	L	E	G	C	D	V	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	F	T	L	E
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	K	G	G	F	T	T	I	C	A	M	P	N	T	R	P	V	P	D	C	R	E	H	M	E	D	L	Q	N	R	I	K	E	K	A	H	V	N	V	L	P	Y	G	A	I	T	V	R	Q	A	G	S	E	M	T	D	F	E	T	L	K	E	L	G	A	F	A	F	T	D	D	G	V	G	V	Q	D	A	S
Template Known Secondary structure					T	T								S		S	S	S		S		S														S		S	S								S	B	G	G	G		S	S	S	B									T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																											.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		Q	M	L	A	W	R	D	H	P	Q	V	T	G	L	A	E	M	M	D	Y	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	R	H	L	T	L	D	G	H	C	P	G	L	G	G	.	.	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		M	M	L	A	A	M	K	R	A	A	K	L	N	M	A	V	V	A	H	C	E	E	N	T	L	I	N	K	G	C	V	H	E	G	K	F	S	E	K	H	G	L	N	G	I	P	S	V	C	E	S	V	H	I	A	R	D	I	L	L	A	E	A	A	D	C	H	Y	H	V	C	H	V	S	T	K	G	S	V	R
Template Known Secondary structure													T	T										G	G	G		T	T		S			T	T						T	T						T																		T							S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	N	A	Y	I	T	A	G	I	E	N	C	H	E	S	Y	Q	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	I	N	E	.	.	F	N	S	P	Q	C	M	L	C	T	D	D	R	N	P	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	R	D	A	K	R	A	G	I	K	V	T	A	E	V	T	P	H	H	L	V	L	C	E	D	D	I	P	S	A	D	P	N	F	K	M	N	P	P	L	R	G	K	E	D	H	E	A	L	I	E	G	L	L	D	G	T	I	D	M	I	A	T	D	H	A	P	H	T	A	E	E	K	A	Q	G	I	E	R
Template Known Secondary structure										T																G	G	G			S	S		G	G	G			S	S																		T	S	S							B										S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
					289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	W	E	I	A	H	E	G	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R	V	A	S	W	S	T	A	R	H	F	G	L	N	H	L	G	L	L	A	P	G	K	Q	A	D	I	V	L	L	S	D	A	R	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																										.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.
Template Sequence		A	P	F	G	I	T	G	F	E	T	A	F	P	L	L	Y	T	N	L	V	K	K	G	I	I	T	L	E	Q	L	I	Q	F	L	T	E	K	P	A	D	T	F	G	L	.	E	A	G	R	L	K	E	G	R	T	A	D	I	T	I	I	D	L	E	Q	E	E	E	I	D	P	T	T	F	L	S	K	G	K	N
Template Known Secondary structure		S							T	T	T									T	T	T	T	T	S	S								T	T	T								T		.	S		S				T	T	S	B								S	S							G	G	G		S	S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
												353	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	T	V	Q	Q	V	L	V	K	G	E	P	I	D	A	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	F	A	G	W	K	C	Q	G	W	P	V	M	T	I	V	G	G	K	I	A	W	Q	K
Template Known Secondary structure			T	T	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions