Job Description P31441 Confidence 100.00% Date Thu Jan 5 11:47:32 GMT 2012 Rank 32 Aligned Residues 338 % Identity 15% Template c3lnpA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolase family protein olei01672_1_465; PDBTitle: crystal structure of amidohydrolase family protein2 olei01672_1_465 from oleispira antarctica Resolution 2.10 Å

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		29	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																														.																													.	.	.	.	.	.	.
Query SS confidence														.	.	.																														.																													.	.	.	.	.	.	.
Query Sequence		V	A	D	Y	I	I	D	N	V	S	I	L	.	.	.	D	L	I	N	G	G	E	I	S	G	P	I	V	I	K	G	R	Y	I	A	G	V	G	A	E	Y	T	D	A	.	P	A	L	Q	R	I	D	A	R	G	A	T	A	V	P	G	F	I	D	A	H	L	H	I	E	S	S	M	.	.	.	.	.	.	.
Query Conservation														.	.	.																														.																													.	.	.	.	.	.	.
Alig confidence														.	.	.																														.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	D	L	R	I	N	S	H	W	I	I	P	I	E	N	T	V	S	N	I	L	I	D	H	C	L	L	I	K	D	G	I	I	L	A	I	E	P	Q	S	S	C	Q	I	P	A	T	E	T	L	D	L	G	Q	Q	V	L	X	P	G	W	V	N	A	H	G	H	A	A	X	S	L	F	R	G	L	A	D	D
Template Known Secondary structure															S	S					S											T	T								T	T	T													S											S			G	G	G	G	G	G	T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
																											98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	P	V	T	F	E	T	A	T	L	P	R	G	L	T	T	V	I	C	D	P	H	E	I	V	N	V	M	G	E	A	G	F	A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																																.	.	.	.	.
Template Sequence		L	P	L	X	T	W	L	Q	E	H	V	W	P	A	E	A	Q	H	V	D	E	H	F	V	K	Q	G	T	E	L	A	I	A	E	X	I	Q	S	G	T	T	T	F	A	D	X	.	.	.	.	.	Y	F	Y	P	Q	Q	S	G	E	A	A	L	A	A	G	I	R	A	V	C	F	A	P	V	L	D	F	P	T
Template Known Secondary structure											T										S																		T	T								.	.	.	.	.		S													T											S	S
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		V	P	A	L	E	G	C	D	V	N	G	A	S	F	T	L	E	Q	M	L	A	W	R	D	H	P	Q	V	T	G	L	A	E	M	M	D	Y	P	G	V	I	S	G	Q	N	A	L	L	D	K	L	.	.	.	D	A	F	R	H	L	T	L	D	G	H	C	P	G	L	G	G	K	E	L	N	A	Y	I	T	A
Query Conservation																																																					.	.	.
Alig confidence																																																					.	.	.
Template Conservation
Template Sequence		N	Y	A	Q	N	A	D	E	Y	I	R	K	A	I	E	C	N	D	R	F	N	N	H	P	X	N	E	Q	G	L	V	Q	I	G	F	G	P	H	A	P	Y	T	V	S	D	E	P	L	K	E	I	T	X	L	S	D	Q	L	D	X	P	V	Q	I	H	L	H	E	T	D	F	E	V	S	E	S	L	E	T	F
Template Known Secondary structure		S	S		S	S																	S		G	G	G	T	T												T	T	T	S																T								S		S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		230																		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	N	C	H	E	S	Y	Q	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	I	N	E	.	F	N	S	P	Q	C	M	L	C	T	D	D	R	N	P	W	E	I
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.
Template Conservation
Template Sequence		N	K	R	P	T	Q	R	L	A	D	I	G	F	L	N	E	R	V	S	C	V	H	X	T	Q	V	D	D	G	D	I	K	I	L	Q	K	T	G	A	S	I	I	H	C	P	E	S	N	L	K	L	A	S	G	F	C	P	I	A	K	L	S	A	A	N	I	P	L	A	I	G	T	D	G	A	A	S	N	N	D
Template Known Secondary structure		S	S									T	T			S	T	T								S																										T	T												T	T										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		292	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.																																								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																																								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	.	.	.	.	.	E	G	H	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y	R	V	A	S	W	S	T	A	R	H	F	G	L	N	H	L	.	G	L	L	A	P	G	K	Q	A	D	I	V	L	L	S	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.	.																																								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																																								.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	X	F	S	E	T	K	T	A	A	L	L	A	K	G	V	S	Q	D	A	S	A	I	P	A	I	E	A	L	T	X	A	T	L	G	G	A	R	A	L	G	I	D	D	I	T	G	S	L	K	P	G	K	A	A	D	I	Q	A	I	D	L	N	T	L	S	S	Q	P	V	F	D	P	V	S	H	X	V	Y
Template Known Secondary structure																				T		T	T	S	S										T							T	T		T	T	T	S	S	S			T	T	S	B										S	G	G	G		S		S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
				350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	K	V	T	V	Q	Q	V	L	V	K	G	E	P	I	D	A	Q	T	L	Q	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		C	T	K	S	T	Q	V	S	H	V	W	V	N	G	R	C	L	L	K	N	G	E	L	T
Template Known Secondary structure		S			G	G	G							T	T						T	T			S
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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