Job Description P31441 Confidence 98.98% Date Thu Jan 5 11:47:32 GMT 2012 Rank 122 Aligned Residues 242 % Identity 17% Template c3k2gA_ PDB info PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides Resolution 1.80 Å

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		85	.	.	.	.	90	.	.	.																																										.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		G	F	I	D	A	H	L	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	S	M	M	T	P	V	T	F	E	T	A	T	L	P	.	.	.	R	G	L	T	T	V	I	C	D	P	H
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.									.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		G	H	T	L	X	H	E	H	L	Q	N	D	C	R	C	W	W	N	P	P	Q	E	P	E	R	Q	Y	L	A	E	A	P	I	S	I	E	I	L	S	E	L	R	Q	D	P	F	V	N	K	H	N	I	A	L	D	D	L	D	L	A	I	A	E	V	K	Q	F	A	A	V	G	G	R	S	I	V	D	.	.	.
Template Known Secondary structure			S			S	S			S	S				G	G	G						S	G	G	G	T					S				G	G	G						T		G	G	G		T	T	T	S																		T	T							.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.											.	.	.	.	.	.	.	190
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	V	N	V	M	G	E	A	G	F	A	W	F	A	R	C	A	E	Q	A	R	Q	N	Q	Y	L	Q	V	S	S	C	V	P	A	L	E	G	C	D	V	N	G	A	S	F	T	L	E	Q	M	L	A	W	R	D	H	P	Q	V	T	G	.	.	.	.	.	.	.	.	.	.	L	A	E	M	M	D	Y	P
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																				.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																				.	.
Template Sequence		.	P	T	C	R	G	I	G	R	D	P	V	K	L	R	R	I	S	A	E	T	G	V	Q	V	V	X	G	A	G	Y	Y	L	A	S	S	.	.	X	P	E	T	A	A	R	L	S	A	D	D	I	A	D	E	I	V	A	E	A	L	E	G	T	D	G	T	D	A	R	I	G	L	I	G	E	I	G	V	S	S
Template Known Secondary structure		.				B	T	T	T																						S	B			G	G	G	.	.			G	G	G	G	T																T		B	T	T	B	S				S	S								T
Template Predicted Secondary structure		.																																				.	.
Template SS confidence
			104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																			.	.	.										.	.	.																	.	.	.	.	.							.	.	.																		.
Query SS confidence																			.	.	.										.	.	.																	.	.	.	.	.							.	.	.																		.
Query Sequence		G	V	I	S	G	Q	N	A	L	L	D	K	L	D	A	F	R	.	.	.	H	L	T	L	D	G	H	C	P	.	.	.	G	L	G	G	K	E	L	N	A	Y	I	T	A	G	I	E	.	.	.	.	.	N	C	H	E	S	Y	.	.	.	Q	L	E	E	G	R	R	K	L	Q	L	G	M	S	L	M	I	.
Query Conservation																			.	.	.										.	.	.																	.	.	.	.	.							.	.	.																		.
Alig confidence																			.	.	.										.	.	.																	.	.	.	.	.							.	.	.																		.
Template Conservation
Template Sequence		D	F	T	A	E	E	E	K	S	L	R	G	A	A	R	A	Q	V	R	T	G	L	P	L	X	V	H	L	P	G	W	F	R	L	A	H	R	V	L	D	L	V	E	E	E	G	A	D	L	R	H	T	V	L	C	H	X	N	P	S	H	X	D	P	V	Y	Q	A	T	L	A	Q	R	G	A	F	L	E	F	D
Template Known Secondary structure		T																													T	T	S													T	T			G	G	G							G	G	G	T	T												T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
															256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	G	S	A	A	R	N	L	N	A	L	A	P	L	I	N	E	F	N	S	P	Q	C	M	L	C	T	D	D	R	N	P	W	E	I	A	H	E	G	H	.	.	.	.	.	.	I	D	A	L	I	R	R	L	I	E	Q	H	N	V	P	L	H	V	A	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.													.
Template Conservation																																																																										.
Template Sequence		X	I	G	X	D	F	F	Y	A	D	Q	G	V	Q	C	P	S	D	D	E	V	A	R	A	I	L	G	L	A	D	H	G	Y	L	D	R	I	L	L	S	H	D	V	F	V	K	X	X	L	T	R	Y	G	G	N	G	Y	A	F	V	T	K	H	F	L	P	R	L	R	R	H	G	.	L	D	D	A	A	L	E
Template Known Secondary structure			T	T						T	T	T	T																			T	T		G	G	G									S	G	G	G	S	G	G	G	T	S		T	T	S													T	T	.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	S	W	S	T	A	R	H	F	G	L	N	H	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	X	V	T	N	P	R	R	V	F	D	A	S	I	E	G
Template Known Secondary structure					T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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